Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDHB7Q9Y5E2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB7Q9Y5E2 PRELID1P1-202ENST00000567272 903 ntBASIC20.35■□□□□ 0.85
PCDHB7Q9Y5E2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDHB7Q9Y5E2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHB7Q9Y5E2 AC079602.3-201ENST00000623931 403 ntBASIC20.35■□□□□ 0.85
PCDHB7Q9Y5E2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PCDHB7Q9Y5E2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PCDHB7Q9Y5E2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB7Q9Y5E2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB7Q9Y5E2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB7Q9Y5E2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PCDHB7Q9Y5E2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 MIR3917-201ENST00000580971 93 ntBASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 AL162741.1-201ENST00000565563 1558 ntBASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB7Q9Y5E2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB7Q9Y5E2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PCDHB7Q9Y5E2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHB7Q9Y5E2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB7Q9Y5E2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PCDHB7Q9Y5E2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB7Q9Y5E2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
PCDHB7Q9Y5E2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHB7Q9Y5E2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB7Q9Y5E2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHB7Q9Y5E2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHB7Q9Y5E2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDHB7Q9Y5E2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHB7Q9Y5E2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHB7Q9Y5E2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PCDHB7Q9Y5E2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHB7Q9Y5E2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHB7Q9Y5E2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHB7Q9Y5E2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PCDHB7Q9Y5E2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHB7Q9Y5E2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.33■□□□□ 0.84
PCDHB7Q9Y5E2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHB7Q9Y5E2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
PCDHB7Q9Y5E2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 HLA-F-220ENST00000434407 884 ntBASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 KRT8P26-201ENST00000534154 1276 ntBASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 AL136038.4-201ENST00000603606 1261 ntBASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 AL391807.1-203ENST00000604392 2365 ntBASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB7Q9Y5E2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB7Q9Y5E2 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.31■□□□□ 0.84
PCDHB7Q9Y5E2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB7Q9Y5E2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB7Q9Y5E2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms