Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTCBQ9Y3I0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTCBQ9Y3I0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTCBQ9Y3I0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
RTCBQ9Y3I0 AC233702.3-201ENST00000578656 1387 ntBASIC23.87■■□□□ 1.41
RTCBQ9Y3I0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RTCBQ9Y3I0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.87■■□□□ 1.41
RTCBQ9Y3I0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RTCBQ9Y3I0 LINC00167-201ENST00000530583 1419 ntBASIC23.86■■□□□ 1.41
RTCBQ9Y3I0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.86■■□□□ 1.41
RTCBQ9Y3I0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTCBQ9Y3I0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
RTCBQ9Y3I0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC23.86■■□□□ 1.41
RTCBQ9Y3I0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC23.86■■□□□ 1.41
RTCBQ9Y3I0 AC099336.1-202ENST00000602961 463 ntBASIC23.86■■□□□ 1.41
RTCBQ9Y3I0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RTCBQ9Y3I0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTCBQ9Y3I0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTCBQ9Y3I0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTCBQ9Y3I0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTCBQ9Y3I0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC23.86■■□□□ 1.41
RTCBQ9Y3I0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC23.86■■□□□ 1.41
RTCBQ9Y3I0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RTCBQ9Y3I0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTCBQ9Y3I0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTCBQ9Y3I0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RTCBQ9Y3I0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RTCBQ9Y3I0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
RTCBQ9Y3I0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.85■■□□□ 1.41
RTCBQ9Y3I0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.85■■□□□ 1.41
RTCBQ9Y3I0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
RTCBQ9Y3I0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RTCBQ9Y3I0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RTCBQ9Y3I0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RTCBQ9Y3I0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.85■■□□□ 1.41
RTCBQ9Y3I0 Z69720.1-201ENST00000601483 472 ntBASIC23.85■■□□□ 1.41
RTCBQ9Y3I0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC23.85■■□□□ 1.41
RTCBQ9Y3I0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTCBQ9Y3I0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.85■■□□□ 1.41
RTCBQ9Y3I0 AL109659.2-201ENST00000606809 1674 ntBASIC23.85■■□□□ 1.41
RTCBQ9Y3I0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTCBQ9Y3I0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 HLA-A-201ENST00000376802 1334 ntBASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 HOXB1-202ENST00000577092 1414 ntBASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTCBQ9Y3I0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC23.83■■□□□ 1.41
RTCBQ9Y3I0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RTCBQ9Y3I0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTCBQ9Y3I0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTCBQ9Y3I0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTCBQ9Y3I0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTCBQ9Y3I0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC23.83■■□□□ 1.41
RTCBQ9Y3I0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RTCBQ9Y3I0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC23.83■■□□□ 1.41
RTCBQ9Y3I0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC23.83■■□□□ 1.41
RTCBQ9Y3I0 PENK-208ENST00000523051 772 ntTSL 5 BASIC23.83■■□□□ 1.41
RTCBQ9Y3I0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.83■■□□□ 1.41
RTCBQ9Y3I0 AC120114.3-201ENST00000611923 658 ntBASIC23.83■■□□□ 1.41
RTCBQ9Y3I0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC23.83■■□□□ 1.41
RTCBQ9Y3I0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTCBQ9Y3I0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.83■■□□□ 1.4
RTCBQ9Y3I0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
RTCBQ9Y3I0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC23.83■■□□□ 1.4
RTCBQ9Y3I0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RTCBQ9Y3I0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
RTCBQ9Y3I0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RTCBQ9Y3I0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTCBQ9Y3I0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTCBQ9Y3I0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTCBQ9Y3I0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTCBQ9Y3I0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTCBQ9Y3I0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTCBQ9Y3I0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC23.82■■□□□ 1.4
RTCBQ9Y3I0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC23.82■■□□□ 1.4
RTCBQ9Y3I0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC23.82■■□□□ 1.4
RTCBQ9Y3I0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC23.82■■□□□ 1.4
RTCBQ9Y3I0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms