Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 AC026366.1-201ENST00000488803 879 ntBASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 AP003097.1-201ENST00000530657 1135 ntBASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HHLA3Q9XRX5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
HHLA3Q9XRX5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.83□□□□□ -0.19
HHLA3Q9XRX5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HHLA3Q9XRX5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
HHLA3Q9XRX5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
HHLA3Q9XRX5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.83□□□□□ -0.19
HHLA3Q9XRX5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HHLA3Q9XRX5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms