Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 AP002383.4-201ENST00000442518 975 ntBASIC24.72■■□□□ 1.55
SPG7Q9UQ90 SKP2-204ENST00000508514 821 ntTSL 3 BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 KRT8P26-201ENST00000534154 1276 ntBASIC24.72■■□□□ 1.55
SPG7Q9UQ90 AL136038.4-201ENST00000603606 1261 ntBASIC24.72■■□□□ 1.55
SPG7Q9UQ90 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
SPG7Q9UQ90 TP73-202ENST00000354437 2140 ntTSL 5 BASIC24.71■■□□□ 1.55
SPG7Q9UQ90 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SPG7Q9UQ90 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
SPG7Q9UQ90 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC24.71■■□□□ 1.55
SPG7Q9UQ90 AL391807.1-203ENST00000604392 2365 ntBASIC24.71■■□□□ 1.55
SPG7Q9UQ90 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SPG7Q9UQ90 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SPG7Q9UQ90 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SPG7Q9UQ90 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
SPG7Q9UQ90 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SPG7Q9UQ90 NAA38-203ENST00000575071 553 ntTSL 2 BASIC24.71■■□□□ 1.55
SPG7Q9UQ90 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC24.71■■□□□ 1.55
SPG7Q9UQ90 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
SPG7Q9UQ90 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SPG7Q9UQ90 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SPG7Q9UQ90 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
SPG7Q9UQ90 AL109659.2-201ENST00000606809 1674 ntBASIC24.71■■□□□ 1.55
SPG7Q9UQ90 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
SPG7Q9UQ90 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SPG7Q9UQ90 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.71■■□□□ 1.55
SPG7Q9UQ90 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
SPG7Q9UQ90 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
SPG7Q9UQ90 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
SPG7Q9UQ90 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC24.7■■□□□ 1.55
SPG7Q9UQ90 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC24.7■■□□□ 1.55
SPG7Q9UQ90 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SPG7Q9UQ90 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC24.7■■□□□ 1.54
SPG7Q9UQ90 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SPG7Q9UQ90 MIR662-201ENST00000384847 95 ntBASIC24.7■■□□□ 1.54
SPG7Q9UQ90 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
SPG7Q9UQ90 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SPG7Q9UQ90 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SPG7Q9UQ90 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC24.7■■□□□ 1.54
SPG7Q9UQ90 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SPG7Q9UQ90 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
SPG7Q9UQ90 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SPG7Q9UQ90 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC24.7■■□□□ 1.54
SPG7Q9UQ90 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
SPG7Q9UQ90 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SPG7Q9UQ90 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC24.7■■□□□ 1.54
SPG7Q9UQ90 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24.7■■□□□ 1.54
SPG7Q9UQ90 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC24.7■■□□□ 1.54
SPG7Q9UQ90 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC24.7■■□□□ 1.54
SPG7Q9UQ90 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC24.7■■□□□ 1.54
SPG7Q9UQ90 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
SPG7Q9UQ90 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC24.69■■□□□ 1.54
SPG7Q9UQ90 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC24.69■■□□□ 1.54
SPG7Q9UQ90 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC24.69■■□□□ 1.54
SPG7Q9UQ90 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SPG7Q9UQ90 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC24.69■■□□□ 1.54
SPG7Q9UQ90 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC24.69■■□□□ 1.54
SPG7Q9UQ90 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SPG7Q9UQ90 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
SPG7Q9UQ90 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SPG7Q9UQ90 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SPG7Q9UQ90 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC24.69■■□□□ 1.54
SPG7Q9UQ90 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC24.68■■□□□ 1.54
SPG7Q9UQ90 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC24.68■■□□□ 1.54
SPG7Q9UQ90 RCC2P3-201ENST00000418112 1537 ntBASIC24.68■■□□□ 1.54
SPG7Q9UQ90 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SPG7Q9UQ90 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SPG7Q9UQ90 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SPG7Q9UQ90 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC24.68■■□□□ 1.54
SPG7Q9UQ90 AP002414.4-201ENST00000589764 1148 ntBASIC24.68■■□□□ 1.54
SPG7Q9UQ90 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC24.68■■□□□ 1.54
SPG7Q9UQ90 KRT8P7-201ENST00000533003 1432 ntBASIC24.68■■□□□ 1.54
SPG7Q9UQ90 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SPG7Q9UQ90 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SPG7Q9UQ90 AL512353.2-201ENST00000448759 1962 ntBASIC24.67■■□□□ 1.54
SPG7Q9UQ90 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 TEX21P-204ENST00000641479 1693 ntBASIC24.67■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms