Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 AP000525.1-201ENST00000608286 694 ntBASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 AC008622.2-201ENST00000617006 1229 ntBASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGC3Q9UN70 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PCDHGC3Q9UN70 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHGC3Q9UN70 MTMR9LP-203ENST00000426597 1545 ntBASIC19.97■□□□□ 0.79
PCDHGC3Q9UN70 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGC3Q9UN70 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
PCDHGC3Q9UN70 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
PCDHGC3Q9UN70 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHGC3Q9UN70 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGC3Q9UN70 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGC3Q9UN70 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PCDHGC3Q9UN70 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGC3Q9UN70 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.97■□□□□ 0.79
PCDHGC3Q9UN70 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
PCDHGC3Q9UN70 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHGC3Q9UN70 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGC3Q9UN70 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGC3Q9UN70 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.97■□□□□ 0.79
PCDHGC3Q9UN70 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC3Q9UN70 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHGC3Q9UN70 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHGC3Q9UN70 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHGC3Q9UN70 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHGC3Q9UN70 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC3Q9UN70 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PCDHGC3Q9UN70 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC3Q9UN70 AL596275.1-201ENST00000423464 877 ntBASIC19.96■□□□□ 0.79
PCDHGC3Q9UN70 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC3Q9UN70 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.96■□□□□ 0.79
PCDHGC3Q9UN70 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHGC3Q9UN70 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PCDHGC3Q9UN70 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC3Q9UN70 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCDHGC3Q9UN70 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
PCDHGC3Q9UN70 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC3Q9UN70 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
PCDHGC3Q9UN70 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC3Q9UN70 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGC3Q9UN70 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGC3Q9UN70 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC3Q9UN70 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC3Q9UN70 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC3Q9UN70 TSPY15P-201ENST00000457163 923 ntBASIC19.95■□□□□ 0.78
PCDHGC3Q9UN70 AL023803.3-201ENST00000615559 522 ntBASIC19.95■□□□□ 0.78
PCDHGC3Q9UN70 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC3Q9UN70 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC3Q9UN70 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGC3Q9UN70 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC3Q9UN70 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC3Q9UN70 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGC3Q9UN70 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC3Q9UN70 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.95■□□□□ 0.78
PCDHGC3Q9UN70 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 ANO7L1-203ENST00000602586 1720 ntBASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 RCC2P3-201ENST00000418112 1537 ntBASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 AL390955.1-201ENST00000428694 934 ntBASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 SLC25A1P2-201ENST00000430693 912 ntBASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 AL020996.1-203ENST00000536896 2307 ntBASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 AL109659.2-201ENST00000606809 1674 ntBASIC19.94■□□□□ 0.78
PCDHGC3Q9UN70 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGC3Q9UN70 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGC3Q9UN70 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDHGC3Q9UN70 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGC3Q9UN70 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHGC3Q9UN70 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHGC3Q9UN70 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDHGC3Q9UN70 MIR1238-201ENST00000408483 83 ntBASIC19.93■□□□□ 0.78
PCDHGC3Q9UN70 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms