Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 AL157888.1-201ENST00000631930 593 ntBASIC20.83■□□□□ 0.93
GTF2IRD1Q9UHL9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
GTF2IRD1Q9UHL9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
GTF2IRD1Q9UHL9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
GTF2IRD1Q9UHL9 AL162741.1-201ENST00000565563 1558 ntBASIC20.83■□□□□ 0.92
GTF2IRD1Q9UHL9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GTF2IRD1Q9UHL9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GTF2IRD1Q9UHL9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.83■□□□□ 0.92
GTF2IRD1Q9UHL9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
GTF2IRD1Q9UHL9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GTF2IRD1Q9UHL9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
GTF2IRD1Q9UHL9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GTF2IRD1Q9UHL9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 AP002383.4-201ENST00000442518 975 ntBASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GTF2IRD1Q9UHL9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 Z82202.1-201ENST00000623446 1880 ntBASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GTF2IRD1Q9UHL9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 PRELID1P1-202ENST00000567272 903 ntBASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 AL136038.4-201ENST00000603606 1261 ntBASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 AC093525.10-201ENST00000625130 1569 ntBASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GTF2IRD1Q9UHL9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 AL391807.1-203ENST00000604392 2365 ntBASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 MIR662-201ENST00000384847 95 ntBASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 KRT8P26-201ENST00000534154 1276 ntBASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
GTF2IRD1Q9UHL9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms