Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC30.11■■■□□ 2.41
RIMBP3Q9UFD9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC30.11■■■□□ 2.41
RIMBP3Q9UFD9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
RIMBP3Q9UFD9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RIMBP3Q9UFD9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
RIMBP3Q9UFD9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RIMBP3Q9UFD9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC30.11■■■□□ 2.41
RIMBP3Q9UFD9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC30.11■■■□□ 2.41
RIMBP3Q9UFD9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RIMBP3Q9UFD9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RIMBP3Q9UFD9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RIMBP3Q9UFD9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
RIMBP3Q9UFD9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
RIMBP3Q9UFD9 AC092474.2-201ENST00000424288 719 ntBASIC30.1■■■□□ 2.41
RIMBP3Q9UFD9 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC30.1■■■□□ 2.41
RIMBP3Q9UFD9 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC30.1■■■□□ 2.41
RIMBP3Q9UFD9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC30.1■■■□□ 2.41
RIMBP3Q9UFD9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
RIMBP3Q9UFD9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
RIMBP3Q9UFD9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
RIMBP3Q9UFD9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC30.09■■■□□ 2.41
RIMBP3Q9UFD9 METTL26-204ENST00000397665 558 ntTSL 2 BASIC30.09■■■□□ 2.41
RIMBP3Q9UFD9 AC104390.1-201ENST00000555663 520 ntBASIC30.09■■■□□ 2.41
RIMBP3Q9UFD9 DUX4L17-201ENST00000557360 1267 ntBASIC30.09■■■□□ 2.41
RIMBP3Q9UFD9 AC093028.1-201ENST00000622998 982 ntBASIC30.09■■■□□ 2.41
RIMBP3Q9UFD9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
RIMBP3Q9UFD9 FEM1AP1-201ENST00000431297 1995 ntBASIC30.09■■■□□ 2.41
RIMBP3Q9UFD9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
RIMBP3Q9UFD9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
RIMBP3Q9UFD9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RIMBP3Q9UFD9 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RIMBP3Q9UFD9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
RIMBP3Q9UFD9 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC30.08■■■□□ 2.41
RIMBP3Q9UFD9 AC025062.2-201ENST00000605477 670 ntBASIC30.08■■■□□ 2.41
RIMBP3Q9UFD9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
RIMBP3Q9UFD9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC30.08■■■□□ 2.41
RIMBP3Q9UFD9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
RIMBP3Q9UFD9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
RIMBP3Q9UFD9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
RIMBP3Q9UFD9 GSAP-205ENST00000430584 600 ntTSL 5 BASIC30.07■■■□□ 2.4
RIMBP3Q9UFD9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
RIMBP3Q9UFD9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
RIMBP3Q9UFD9 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC30.07■■■□□ 2.4
RIMBP3Q9UFD9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
RIMBP3Q9UFD9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC30.07■■■□□ 2.4
RIMBP3Q9UFD9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
RIMBP3Q9UFD9 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC30.07■■■□□ 2.4
RIMBP3Q9UFD9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC30.07■■■□□ 2.4
RIMBP3Q9UFD9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
RIMBP3Q9UFD9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC30.07■■■□□ 2.4
RIMBP3Q9UFD9 DDT-206ENST00000430101 573 ntTSL 2 BASIC30.07■■■□□ 2.4
RIMBP3Q9UFD9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
RIMBP3Q9UFD9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC30.07■■■□□ 2.4
RIMBP3Q9UFD9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC30.07■■■□□ 2.4
RIMBP3Q9UFD9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC30.07■■■□□ 2.4
RIMBP3Q9UFD9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC30.07■■■□□ 2.4
RIMBP3Q9UFD9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RIMBP3Q9UFD9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RIMBP3Q9UFD9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
RIMBP3Q9UFD9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC30.06■■■□□ 2.4
RIMBP3Q9UFD9 GK-202ENST00000378941 458 ntTSL 3 BASIC30.06■■■□□ 2.4
RIMBP3Q9UFD9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC30.06■■■□□ 2.4
RIMBP3Q9UFD9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC30.06■■■□□ 2.4
RIMBP3Q9UFD9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC30.06■■■□□ 2.4
RIMBP3Q9UFD9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC30.06■■■□□ 2.4
RIMBP3Q9UFD9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
RIMBP3Q9UFD9 AC012645.4-201ENST00000610691 1061 ntBASIC30.06■■■□□ 2.4
RIMBP3Q9UFD9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
RIMBP3Q9UFD9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
RIMBP3Q9UFD9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
RIMBP3Q9UFD9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
RIMBP3Q9UFD9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RIMBP3Q9UFD9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC30.05■■■□□ 2.4
RIMBP3Q9UFD9 PRSS29P-201ENST00000440800 595 ntBASIC30.05■■■□□ 2.4
RIMBP3Q9UFD9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC30.05■■■□□ 2.4
RIMBP3Q9UFD9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC30.05■■■□□ 2.4
RIMBP3Q9UFD9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
RIMBP3Q9UFD9 AL353692.3-201ENST00000407031 1396 ntBASIC30.05■■■□□ 2.4
RIMBP3Q9UFD9 AP002414.3-201ENST00000589352 1468 ntBASIC30.05■■■□□ 2.4
RIMBP3Q9UFD9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 AC009947.1-201ENST00000444350 727 ntBASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 AC190387.1-201ENST00000551683 408 ntBASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 AP001271.2-201ENST00000624018 1556 ntBASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC30.04■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms