Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 AC006058.3-201ENST00000606217 1069 ntBASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 ITM2C-210ENST00000620962 501 ntBASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
VTI1BQ9UEU0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 NOC2LP2-201ENST00000407594 1944 ntBASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 AL121906.2-201ENST00000621597 723 ntBASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTI1BQ9UEU0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.6■□□□□ 0.57
VTI1BQ9UEU0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 AC124283.5-201ENST00000624661 1809 ntBASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 AC128676.1-201ENST00000454392 318 ntBASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 AC069544.1-201ENST00000609399 999 ntBASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 AC073648.6-201ENST00000641589 218 ntBASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTI1BQ9UEU0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms