Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 TERF1P2-201ENST00000583350 1212 ntBASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 AC073592.3-201ENST00000625118 1834 ntBASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 LINC02228-203ENST00000641970 1355 ntBASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 AC105020.6-201ENST00000621523 1217 ntBASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 AC134043.2-201ENST00000624206 2238 ntBASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COMMD3Q9UBI1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
COMMD3Q9UBI1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 AL162741.1-201ENST00000565563 1558 ntBASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 AC116351.2-201ENST00000606540 1585 ntBASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 MCRIP2P1-201ENST00000394346 511 ntBASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 AC023632.3-201ENST00000521633 145 ntBASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 AC016405.3-201ENST00000607710 860 ntBASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 AC104417.2-201ENST00000562989 1793 ntBASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COMMD3Q9UBI1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms