Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
DNMT3BQ9UBC3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 MIR3180-5-201ENST00000583743 153 ntBASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 AC092119.3-201ENST00000612618 583 ntBASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DNMT3BQ9UBC3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 AC026396.1-201ENST00000419388 421 ntBASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 KRT8P3-201ENST00000519669 1449 ntBASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DNMT3BQ9UBC3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
DNMT3BQ9UBC3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DNMT3BQ9UBC3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
DNMT3BQ9UBC3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.72■□□□□ 0.75
DNMT3BQ9UBC3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DNMT3BQ9UBC3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DNMT3BQ9UBC3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
DNMT3BQ9UBC3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DNMT3BQ9UBC3 SEC1P-202ENST00000473944 940 ntBASIC19.72■□□□□ 0.75
DNMT3BQ9UBC3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.72■□□□□ 0.75
DNMT3BQ9UBC3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.72■□□□□ 0.75
DNMT3BQ9UBC3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.72■□□□□ 0.75
DNMT3BQ9UBC3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DNMT3BQ9UBC3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.72■□□□□ 0.75
DNMT3BQ9UBC3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DNMT3BQ9UBC3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DNMT3BQ9UBC3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 AC011498.5-201ENST00000592027 486 ntBASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 AC079602.3-201ENST00000623931 403 ntBASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3BQ9UBC3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms