Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN4Q9NRR5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 KRT8P3-201ENST00000519669 1449 ntBASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 MFAP1P1-201ENST00000442257 1255 ntBASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 MIR4497-201ENST00000583208 89 ntBASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN4Q9NRR5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 CRYGFP-201ENST00000418459 633 ntBASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN4Q9NRR5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 RBM17P1-201ENST00000453646 1190 ntBASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 AC093827.2-201ENST00000512654 315 ntBASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 AP005242.2-201ENST00000580065 1175 ntBASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 AC066615.1-201ENST00000640911 628 ntBASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 AC083906.6-201ENST00000641366 219 ntBASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms