Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGAP3Q9NP61 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.22■□□□□ 0.83
ARFGAP3Q9NP61 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ARFGAP3Q9NP61 DUSP5P2-201ENST00000426873 1033 ntBASIC20.22■□□□□ 0.83
ARFGAP3Q9NP61 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.22■□□□□ 0.83
ARFGAP3Q9NP61 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.22■□□□□ 0.83
ARFGAP3Q9NP61 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.22■□□□□ 0.83
ARFGAP3Q9NP61 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGAP3Q9NP61 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ARFGAP3Q9NP61 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ARFGAP3Q9NP61 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.22■□□□□ 0.83
ARFGAP3Q9NP61 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.22■□□□□ 0.83
ARFGAP3Q9NP61 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGAP3Q9NP61 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.22■□□□□ 0.83
ARFGAP3Q9NP61 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGAP3Q9NP61 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGAP3Q9NP61 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGAP3Q9NP61 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 AC092118.2-201ENST00000613495 667 ntBASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ARFGAP3Q9NP61 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
ARFGAP3Q9NP61 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 AL356652.1-201ENST00000615962 565 ntBASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARFGAP3Q9NP61 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 PGM5P4-201ENST00000421970 445 ntBASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 AL589743.5-201ENST00000616611 1050 ntBASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 AC105020.6-201ENST00000621523 1217 ntBASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 AC133041.1-202ENST00000642053 222 ntBASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 AC009053.2-201ENST00000563701 2365 ntBASIC20.19■□□□□ 0.82
ARFGAP3Q9NP61 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.18■□□□□ 0.82
ARFGAP3Q9NP61 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARFGAP3Q9NP61 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.18■□□□□ 0.82
ARFGAP3Q9NP61 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARFGAP3Q9NP61 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARFGAP3Q9NP61 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms