Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.03■□□□□ 0.96
ATP6V0A4Q9HBG4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 FEM1AP3-201ENST00000403722 1741 ntBASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 LINC01238-205ENST00000567549 1107 ntBASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6V0A4Q9HBG4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
ATP6V0A4Q9HBG4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ATP6V0A4Q9HBG4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
ATP6V0A4Q9HBG4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6V0A4Q9HBG4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 FP475955.4-201ENST00000623131 1990 ntBASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ATP6V0A4Q9HBG4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP6V0A4Q9HBG4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP6V0A4Q9HBG4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms