Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 TSPY12P-201ENST00000421279 868 ntBASIC23.85■■□□□ 1.41
CNTNAP4Q9C0A0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC23.85■■□□□ 1.41
CNTNAP4Q9C0A0 IGHV3-47-201ENST00000425060 335 ntBASIC23.85■■□□□ 1.41
CNTNAP4Q9C0A0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CNTNAP4Q9C0A0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CNTNAP4Q9C0A0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CNTNAP4Q9C0A0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.85■■□□□ 1.41
CNTNAP4Q9C0A0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CNTNAP4Q9C0A0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CNTNAP4Q9C0A0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CNTNAP4Q9C0A0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.85■■□□□ 1.41
CNTNAP4Q9C0A0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC23.85■■□□□ 1.41
CNTNAP4Q9C0A0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
CNTNAP4Q9C0A0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
CNTNAP4Q9C0A0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CNTNAP4Q9C0A0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CNTNAP4Q9C0A0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 Z69720.1-201ENST00000601483 472 ntBASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 GPR32P1-201ENST00000601788 811 ntBASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 AC099336.1-202ENST00000602961 463 ntBASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 MIR3180-4-201ENST00000582223 153 ntBASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 AL671883.3-201ENST00000603274 991 ntBASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 IGHV3-41-201ENST00000613121 348 ntBASIC23.84■■□□□ 1.41
CNTNAP4Q9C0A0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CNTNAP4Q9C0A0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CNTNAP4Q9C0A0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CNTNAP4Q9C0A0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC23.83■■□□□ 1.41
CNTNAP4Q9C0A0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CNTNAP4Q9C0A0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CNTNAP4Q9C0A0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CNTNAP4Q9C0A0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CNTNAP4Q9C0A0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC23.83■■□□□ 1.41
CNTNAP4Q9C0A0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CNTNAP4Q9C0A0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.83■■□□□ 1.4
CNTNAP4Q9C0A0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CNTNAP4Q9C0A0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CNTNAP4Q9C0A0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC23.83■■□□□ 1.4
CNTNAP4Q9C0A0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CNTNAP4Q9C0A0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC23.83■■□□□ 1.4
CNTNAP4Q9C0A0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC23.83■■□□□ 1.4
CNTNAP4Q9C0A0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC23.83■■□□□ 1.4
CNTNAP4Q9C0A0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC23.83■■□□□ 1.4
CNTNAP4Q9C0A0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CNTNAP4Q9C0A0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CNTNAP4Q9C0A0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.83■■□□□ 1.4
CNTNAP4Q9C0A0 AL592071.1-201ENST00000611956 408 ntBASIC23.83■■□□□ 1.4
CNTNAP4Q9C0A0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CNTNAP4Q9C0A0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 HLA-A-201ENST00000376802 1334 ntBASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 AC007375.3-201ENST00000600936 2314 ntBASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 MIR564-202ENST00000385049 94 ntBASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 IGHGP-201ENST00000390555 1178 ntBASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CNTNAP4Q9C0A0 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 TEX21P-204ENST00000641479 1693 ntBASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms