Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NKX6-2Q9C056 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
NKX6-2Q9C056 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NKX6-2Q9C056 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NKX6-2Q9C056 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NKX6-2Q9C056 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NKX6-2Q9C056 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
NKX6-2Q9C056 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NKX6-2Q9C056 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NKX6-2Q9C056 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
NKX6-2Q9C056 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-2Q9C056 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-2Q9C056 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
NKX6-2Q9C056 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-2Q9C056 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-2Q9C056 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.33■□□□□ 0.04
NKX6-2Q9C056 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-2Q9C056 MIR4767-201ENST00000582827 78 ntBASIC15.33■□□□□ 0.04
NKX6-2Q9C056 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-2Q9C056 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-2Q9C056 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-2Q9C056 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NKX6-2Q9C056 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
NKX6-2Q9C056 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX6-2Q9C056 AC103702.1-201ENST00000548801 2630 ntBASIC15.32■□□□□ 0.04
NKX6-2Q9C056 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 GUSBP5-201ENST00000418136 578 ntBASIC15.32■□□□□ 0.04
NKX6-2Q9C056 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 MIR4466-201ENST00000606121 54 ntBASIC15.32■□□□□ 0.04
NKX6-2Q9C056 AL358852.1-201ENST00000623174 1268 ntBASIC15.32■□□□□ 0.04
NKX6-2Q9C056 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX6-2Q9C056 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 PCDH8P1-201ENST00000428983 2773 ntBASIC15.31■□□□□ 0.04
NKX6-2Q9C056 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 AC108860.2-201ENST00000562760 2183 ntBASIC15.31■□□□□ 0.04
NKX6-2Q9C056 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX6-2Q9C056 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms