Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
UPF3BQ9BZI7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
UPF3BQ9BZI7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC22.58■■□□□ 1.21
UPF3BQ9BZI7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
UPF3BQ9BZI7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC22.58■■□□□ 1.21
UPF3BQ9BZI7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
UPF3BQ9BZI7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
UPF3BQ9BZI7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
UPF3BQ9BZI7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.58■■□□□ 1.21
UPF3BQ9BZI7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
UPF3BQ9BZI7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
UPF3BQ9BZI7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.58■■□□□ 1.21
UPF3BQ9BZI7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.58■■□□□ 1.21
UPF3BQ9BZI7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.58■■□□□ 1.21
UPF3BQ9BZI7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.58■■□□□ 1.21
UPF3BQ9BZI7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
UPF3BQ9BZI7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
UPF3BQ9BZI7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
UPF3BQ9BZI7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
UPF3BQ9BZI7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 C1QBPP2-201ENST00000528754 825 ntBASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 AC083906.6-201ENST00000641366 219 ntBASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC22.57■■□□□ 1.2
UPF3BQ9BZI7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 AL158047.1-201ENST00000445918 881 ntBASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 AL445675.2-201ENST00000620291 557 ntBASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UPF3BQ9BZI7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 ANO7L1-203ENST00000602586 1720 ntBASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 NIFKP9-201ENST00000419265 221 ntBASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 AC004980.1-204ENST00000429707 299 ntBASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 AC142381.4-202ENST00000563973 229 ntBASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 KRT8P11-201ENST00000409686 1436 ntBASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 HTR7P1-201ENST00000538670 1336 ntBASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.55■■□□□ 1.2
UPF3BQ9BZI7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UPF3BQ9BZI7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
UPF3BQ9BZI7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UPF3BQ9BZI7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
UPF3BQ9BZI7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms