Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 AC018445.3-201ENST00000624177 1945 ntBASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 TSPY14P-201ENST00000303979 915 ntBASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 CCR12P-201ENST00000446203 998 ntBASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 AC128688.1-201ENST00000487626 519 ntBASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2Q9BSQ5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 LINC01023-201ENST00000606054 436 ntBASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 AC010947.1-201ENST00000623454 693 ntBASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 AC133561.5-201ENST00000635547 218 ntBASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 AC116562.4-202ENST00000641738 218 ntBASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.61■□□□□ 0.57
CCM2Q9BSQ5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 LINC01568-207ENST00000641790 1380 ntBASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 AC211429.1-201ENST00000415277 523 ntBASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 TSPY17P-201ENST00000450329 467 ntBASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 AL023803.3-201ENST00000615559 522 ntBASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2Q9BSQ5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 KRT18P22-201ENST00000402024 1347 ntBASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms