Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
VPS25Q9BRG1 DOC2GP-204ENST00000639052 2548 ntBASIC13.22□□□□□ -0.29
VPS25Q9BRG1 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
VPS25Q9BRG1 WIZP1-201ENST00000531444 2299 ntBASIC13.22□□□□□ -0.29
VPS25Q9BRG1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms