Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPPED1Q9BRF8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPPED1Q9BRF8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 POM121L13P-201ENST00000422362 380 ntBASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 NBPF21P-201ENST00000425093 1451 ntBASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 AC068880.1-201ENST00000507289 2297 ntBASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.81■□□□□ 0.44
CPPED1Q9BRF8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 AC069152.1-201ENST00000438030 544 ntBASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPPED1Q9BRF8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 RCC2P6-201ENST00000526625 1557 ntBASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 AL162741.1-201ENST00000565563 1558 ntBASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 MTMR9LP-203ENST00000426597 1545 ntBASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 PRKY-204ENST00000533551 1019 ntBASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 PCDHB18P-201ENST00000524813 2368 ntBASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPPED1Q9BRF8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.78■□□□□ 0.44
CPPED1Q9BRF8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.78■□□□□ 0.44
CPPED1Q9BRF8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPPED1Q9BRF8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPPED1Q9BRF8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.78■□□□□ 0.44
CPPED1Q9BRF8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPPED1Q9BRF8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.78■□□□□ 0.44
CPPED1Q9BRF8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPPED1Q9BRF8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPPED1Q9BRF8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CPPED1Q9BRF8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CPPED1Q9BRF8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPPED1Q9BRF8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.78■□□□□ 0.44
CPPED1Q9BRF8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.78■□□□□ 0.44
CPPED1Q9BRF8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.78■□□□□ 0.44
CPPED1Q9BRF8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms