Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
COL21A1Q96P44 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL21A1Q96P44 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL21A1Q96P44 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL21A1Q96P44 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL21A1Q96P44 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL21A1Q96P44 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.89■□□□□ 0.45
COL21A1Q96P44 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
COL21A1Q96P44 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.89■□□□□ 0.45
COL21A1Q96P44 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.89■□□□□ 0.45
COL21A1Q96P44 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.89■□□□□ 0.45
COL21A1Q96P44 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.89■□□□□ 0.45
COL21A1Q96P44 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.89■□□□□ 0.45
COL21A1Q96P44 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COL21A1Q96P44 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.89■□□□□ 0.45
COL21A1Q96P44 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.89■□□□□ 0.45
COL21A1Q96P44 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL21A1Q96P44 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL21A1Q96P44 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COL21A1Q96P44 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
COL21A1Q96P44 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
COL21A1Q96P44 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.89■□□□□ 0.45
COL21A1Q96P44 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.89■□□□□ 0.45
COL21A1Q96P44 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.89■□□□□ 0.45
COL21A1Q96P44 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COL21A1Q96P44 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
COL21A1Q96P44 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.88■□□□□ 0.45
COL21A1Q96P44 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.88■□□□□ 0.45
COL21A1Q96P44 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.88■□□□□ 0.45
COL21A1Q96P44 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.88■□□□□ 0.45
COL21A1Q96P44 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.88■□□□□ 0.45
COL21A1Q96P44 AF186192.3-201ENST00000583427 947 ntBASIC17.88■□□□□ 0.45
COL21A1Q96P44 AL353708.3-201ENST00000610272 989 ntBASIC17.88■□□□□ 0.45
COL21A1Q96P44 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.88■□□□□ 0.45
COL21A1Q96P44 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.88■□□□□ 0.45
COL21A1Q96P44 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.88■□□□□ 0.45
COL21A1Q96P44 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.88■□□□□ 0.45
COL21A1Q96P44 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
COL21A1Q96P44 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL21A1Q96P44 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL21A1Q96P44 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL21A1Q96P44 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL21A1Q96P44 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.87■□□□□ 0.45
COL21A1Q96P44 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL21A1Q96P44 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL21A1Q96P44 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL21A1Q96P44 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL21A1Q96P44 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL21A1Q96P44 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL21A1Q96P44 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
COL21A1Q96P44 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
COL21A1Q96P44 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.87■□□□□ 0.45
COL21A1Q96P44 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL21A1Q96P44 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.87■□□□□ 0.45
COL21A1Q96P44 AC008550.1-201ENST00000511500 884 ntBASIC17.87■□□□□ 0.45
COL21A1Q96P44 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL21A1Q96P44 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.87■□□□□ 0.45
COL21A1Q96P44 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.87■□□□□ 0.45
COL21A1Q96P44 AP001412.1-201ENST00000608405 714 ntBASIC17.87■□□□□ 0.45
COL21A1Q96P44 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.87■□□□□ 0.45
COL21A1Q96P44 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.87■□□□□ 0.45
COL21A1Q96P44 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL21A1Q96P44 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
COL21A1Q96P44 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL21A1Q96P44 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.87■□□□□ 0.45
COL21A1Q96P44 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL21A1Q96P44 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL21A1Q96P44 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL21A1Q96P44 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL21A1Q96P44 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL21A1Q96P44 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL21A1Q96P44 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL21A1Q96P44 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
COL21A1Q96P44 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL21A1Q96P44 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.86■□□□□ 0.45
COL21A1Q96P44 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms