Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
NBPF4Q96M43 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
NBPF4Q96M43 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
NBPF4Q96M43 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
NBPF4Q96M43 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NBPF4Q96M43 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC24.93■■□□□ 1.58
NBPF4Q96M43 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NBPF4Q96M43 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
NBPF4Q96M43 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NBPF4Q96M43 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NBPF4Q96M43 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NBPF4Q96M43 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC24.93■■□□□ 1.58
NBPF4Q96M43 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC24.93■■□□□ 1.58
NBPF4Q96M43 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC24.93■■□□□ 1.58
NBPF4Q96M43 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NBPF4Q96M43 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC24.93■■□□□ 1.58
NBPF4Q96M43 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC24.93■■□□□ 1.58
NBPF4Q96M43 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC24.93■■□□□ 1.58
NBPF4Q96M43 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NBPF4Q96M43 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
NBPF4Q96M43 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NBPF4Q96M43 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC24.93■■□□□ 1.58
NBPF4Q96M43 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NBPF4Q96M43 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
NBPF4Q96M43 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC24.93■■□□□ 1.58
NBPF4Q96M43 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.92■■□□□ 1.58
NBPF4Q96M43 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.92■■□□□ 1.58
NBPF4Q96M43 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
NBPF4Q96M43 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
NBPF4Q96M43 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NBPF4Q96M43 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC24.92■■□□□ 1.58
NBPF4Q96M43 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC24.92■■□□□ 1.58
NBPF4Q96M43 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC24.92■■□□□ 1.58
NBPF4Q96M43 PRELID1P1-202ENST00000567272 903 ntBASIC24.92■■□□□ 1.58
NBPF4Q96M43 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
NBPF4Q96M43 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC24.92■■□□□ 1.58
NBPF4Q96M43 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
NBPF4Q96M43 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
NBPF4Q96M43 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NBPF4Q96M43 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NBPF4Q96M43 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NBPF4Q96M43 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NBPF4Q96M43 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC24.91■■□□□ 1.58
NBPF4Q96M43 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NBPF4Q96M43 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
NBPF4Q96M43 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
NBPF4Q96M43 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
NBPF4Q96M43 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.91■■□□□ 1.58
NBPF4Q96M43 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC24.91■■□□□ 1.58
NBPF4Q96M43 TBCB-205ENST00000585746 875 ntTSL 3 BASIC24.91■■□□□ 1.58
NBPF4Q96M43 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
NBPF4Q96M43 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC24.91■■□□□ 1.58
NBPF4Q96M43 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
NBPF4Q96M43 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NBPF4Q96M43 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NBPF4Q96M43 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NBPF4Q96M43 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
NBPF4Q96M43 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
NBPF4Q96M43 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NBPF4Q96M43 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
NBPF4Q96M43 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC24.9■■□□□ 1.58
NBPF4Q96M43 PCDHAC2-203ENST00000615316 3011 ntBASIC24.9■■□□□ 1.58
NBPF4Q96M43 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NBPF4Q96M43 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.9■■□□□ 1.58
NBPF4Q96M43 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC24.9■■□□□ 1.58
NBPF4Q96M43 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC24.9■■□□□ 1.58
NBPF4Q96M43 NAA38-203ENST00000575071 553 ntTSL 2 BASIC24.9■■□□□ 1.58
NBPF4Q96M43 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
NBPF4Q96M43 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC24.9■■□□□ 1.58
NBPF4Q96M43 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC24.9■■□□□ 1.58
NBPF4Q96M43 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC24.9■■□□□ 1.58
NBPF4Q96M43 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
NBPF4Q96M43 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NBPF4Q96M43 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
NBPF4Q96M43 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
NBPF4Q96M43 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
NBPF4Q96M43 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC24.89■■□□□ 1.58
NBPF4Q96M43 TSPY22P-201ENST00000427496 604 ntBASIC24.89■■□□□ 1.58
NBPF4Q96M43 CHCHD2P8-201ENST00000429873 447 ntBASIC24.89■■□□□ 1.58
NBPF4Q96M43 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC24.89■■□□□ 1.58
NBPF4Q96M43 KRT18P23-201ENST00000435622 1283 ntBASIC24.89■■□□□ 1.58
NBPF4Q96M43 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
NBPF4Q96M43 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC24.89■■□□□ 1.58
NBPF4Q96M43 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC24.89■■□□□ 1.58
NBPF4Q96M43 AC104390.1-201ENST00000555663 520 ntBASIC24.89■■□□□ 1.58
NBPF4Q96M43 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC24.89■■□□□ 1.58
NBPF4Q96M43 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC24.89■■□□□ 1.58
NBPF4Q96M43 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
NBPF4Q96M43 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
NBPF4Q96M43 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
NBPF4Q96M43 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC24.89■■□□□ 1.57
NBPF4Q96M43 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
NBPF4Q96M43 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
NBPF4Q96M43 LINC01521-201ENST00000504184 1943 ntBASIC24.88■■□□□ 1.57
NBPF4Q96M43 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NBPF4Q96M43 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
NBPF4Q96M43 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
NBPF4Q96M43 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC24.88■■□□□ 1.57
NBPF4Q96M43 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NBPF4Q96M43 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms