Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRIP1Q96KN7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 AL121894.2-201ENST00000602977 491 ntBASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 AL358472.4-201ENST00000633140 710 ntBASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRIP1Q96KN7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPGRIP1Q96KN7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPGRIP1Q96KN7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPGRIP1Q96KN7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPGRIP1Q96KN7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.83■□□□□ 0.93
RPGRIP1Q96KN7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RPGRIP1Q96KN7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPGRIP1Q96KN7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.83■□□□□ 0.93
RPGRIP1Q96KN7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPGRIP1Q96KN7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
RPGRIP1Q96KN7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPGRIP1Q96KN7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPGRIP1Q96KN7 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.83■□□□□ 0.93
RPGRIP1Q96KN7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.83■□□□□ 0.93
RPGRIP1Q96KN7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.83■□□□□ 0.93
RPGRIP1Q96KN7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.83■□□□□ 0.93
RPGRIP1Q96KN7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPGRIP1Q96KN7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RPGRIP1Q96KN7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPGRIP1Q96KN7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPGRIP1Q96KN7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPGRIP1Q96KN7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.83■□□□□ 0.92
RPGRIP1Q96KN7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPGRIP1Q96KN7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 ECEL1P2-202ENST00000465689 757 ntBASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 C2orf69P3-201ENST00000565542 1120 ntBASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 AC091076.1-201ENST00000610741 619 ntBASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RPGRIP1Q96KN7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 AP001271.2-201ENST00000624018 1556 ntBASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms