Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM11Q96F44 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM11Q96F44 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM11Q96F44 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM11Q96F44 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM11Q96F44 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM11Q96F44 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.02■□□□□ 0.8
TRIM11Q96F44 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM11Q96F44 AL031985.4-201ENST00000642138 673 ntBASIC20.02■□□□□ 0.8
TRIM11Q96F44 RCC2P6-201ENST00000526625 1557 ntBASIC20.02■□□□□ 0.8
TRIM11Q96F44 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM11Q96F44 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM11Q96F44 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM11Q96F44 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM11Q96F44 WIZP1-201ENST00000531444 2299 ntBASIC20.02■□□□□ 0.8
TRIM11Q96F44 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM11Q96F44 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.02■□□□□ 0.79
TRIM11Q96F44 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM11Q96F44 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM11Q96F44 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
TRIM11Q96F44 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.02■□□□□ 0.79
TRIM11Q96F44 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM11Q96F44 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM11Q96F44 HCG11-201ENST00000411553 5696 ntBASIC20.01■□□□□ 0.79
TRIM11Q96F44 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM11Q96F44 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TRIM11Q96F44 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM11Q96F44 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM11Q96F44 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM11Q96F44 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM11Q96F44 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM11Q96F44 FAM201B-201ENST00000458407 597 ntBASIC20.01■□□□□ 0.79
TRIM11Q96F44 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM11Q96F44 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.01■□□□□ 0.79
TRIM11Q96F44 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.01■□□□□ 0.79
TRIM11Q96F44 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.01■□□□□ 0.79
TRIM11Q96F44 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.01■□□□□ 0.79
TRIM11Q96F44 AC073195.1-201ENST00000607241 877 ntBASIC20.01■□□□□ 0.79
TRIM11Q96F44 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
TRIM11Q96F44 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM11Q96F44 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM11Q96F44 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM11Q96F44 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM11Q96F44 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM11Q96F44 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM11Q96F44 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM11Q96F44 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
TRIM11Q96F44 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRIM11Q96F44 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRIM11Q96F44 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM11Q96F44 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM11Q96F44 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20■□□□□ 0.79
TRIM11Q96F44 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM11Q96F44 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20■□□□□ 0.79
TRIM11Q96F44 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRIM11Q96F44 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM11Q96F44 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM11Q96F44 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM11Q96F44 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
TRIM11Q96F44 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20■□□□□ 0.79
TRIM11Q96F44 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20■□□□□ 0.79
TRIM11Q96F44 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM11Q96F44 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20■□□□□ 0.79
TRIM11Q96F44 AC091390.4-202ENST00000476426 537 ntBASIC20■□□□□ 0.79
TRIM11Q96F44 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20■□□□□ 0.79
TRIM11Q96F44 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
TRIM11Q96F44 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM11Q96F44 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20■□□□□ 0.79
TRIM11Q96F44 AF186192.3-201ENST00000583427 947 ntBASIC20■□□□□ 0.79
TRIM11Q96F44 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20■□□□□ 0.79
TRIM11Q96F44 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20■□□□□ 0.79
TRIM11Q96F44 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20■□□□□ 0.79
TRIM11Q96F44 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM11Q96F44 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM11Q96F44 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM11Q96F44 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM11Q96F44 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM11Q96F44 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM11Q96F44 KRT8P3-201ENST00000519669 1449 ntBASIC20■□□□□ 0.79
TRIM11Q96F44 HEIH-201ENST00000623091 1652 ntBASIC20■□□□□ 0.79
TRIM11Q96F44 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TRIM11Q96F44 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM11Q96F44 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM11Q96F44 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM11Q96F44 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM11Q96F44 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM11Q96F44 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM11Q96F44 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM11Q96F44 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM11Q96F44 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM11Q96F44 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
TRIM11Q96F44 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRIM11Q96F44 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.99■□□□□ 0.79
TRIM11Q96F44 FAM197Y4-202ENST00000622692 608 ntBASIC19.99■□□□□ 0.79
TRIM11Q96F44 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM11Q96F44 CR392000.1-201ENST00000624770 1228 ntBASIC19.99■□□□□ 0.79
TRIM11Q96F44 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.99■□□□□ 0.79
TRIM11Q96F44 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM11Q96F44 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRIM11Q96F44 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms