Protein–RNA interactions for Protein: Q96BQ5

CCDC127, Coiled-coil domain-containing protein 127, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC127Q96BQ5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CCDC127Q96BQ5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC127Q96BQ5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC127Q96BQ5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC127Q96BQ5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC127Q96BQ5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC127Q96BQ5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC127Q96BQ5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC127Q96BQ5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC127Q96BQ5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC127Q96BQ5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC127Q96BQ5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC127Q96BQ5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CCDC127Q96BQ5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC127Q96BQ5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 FITM1-202ENST00000559294 800 ntBASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC127Q96BQ5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC127Q96BQ5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CCDC127Q96BQ5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC127Q96BQ5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
CCDC127Q96BQ5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC127Q96BQ5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC127Q96BQ5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC127Q96BQ5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CCDC127Q96BQ5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC127Q96BQ5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC127Q96BQ5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CCDC127Q96BQ5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC127Q96BQ5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC127Q96BQ5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC127Q96BQ5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC127Q96BQ5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC127Q96BQ5 AP005242.2-201ENST00000580065 1175 ntBASIC20.58■□□□□ 0.89
CCDC127Q96BQ5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC127Q96BQ5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC127Q96BQ5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.58■□□□□ 0.88
CCDC127Q96BQ5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC127Q96BQ5 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC127Q96BQ5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC127Q96BQ5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC127Q96BQ5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC127Q96BQ5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC127Q96BQ5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.58■□□□□ 0.88
CCDC127Q96BQ5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 AC006333.2-201ENST00000607957 2099 ntBASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 KRT8P9-201ENST00000558927 1449 ntBASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CCDC127Q96BQ5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms