Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.17■□□□□ 0.82
DDX1Q92499 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX1Q92499 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX1Q92499 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
DDX1Q92499 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX1Q92499 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX1Q92499 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX1Q92499 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX1Q92499 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX1Q92499 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
DDX1Q92499 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.17■□□□□ 0.82
DDX1Q92499 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
DDX1Q92499 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.17■□□□□ 0.82
DDX1Q92499 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.17■□□□□ 0.82
DDX1Q92499 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.17■□□□□ 0.82
DDX1Q92499 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.17■□□□□ 0.82
DDX1Q92499 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DDX1Q92499 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.17■□□□□ 0.82
DDX1Q92499 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.17■□□□□ 0.82
DDX1Q92499 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.17■□□□□ 0.82
DDX1Q92499 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX1Q92499 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX1Q92499 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
DDX1Q92499 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
DDX1Q92499 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX1Q92499 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX1Q92499 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX1Q92499 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX1Q92499 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX1Q92499 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX1Q92499 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX1Q92499 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX1Q92499 RNF165-205ENST00000588679 2904 ntBASIC20.16■□□□□ 0.82
DDX1Q92499 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX1Q92499 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX1Q92499 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.16■□□□□ 0.82
DDX1Q92499 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
DDX1Q92499 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX1Q92499 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX1Q92499 CKBP1-201ENST00000565489 1086 ntBASIC20.16■□□□□ 0.82
DDX1Q92499 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX1Q92499 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX1Q92499 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX1Q92499 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX1Q92499 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX1Q92499 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX1Q92499 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX1Q92499 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX1Q92499 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX1Q92499 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
DDX1Q92499 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX1Q92499 AC116562.2-201ENST00000507042 360 ntBASIC20.15■□□□□ 0.82
DDX1Q92499 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.15■□□□□ 0.82
DDX1Q92499 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.15■□□□□ 0.82
DDX1Q92499 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.15■□□□□ 0.82
DDX1Q92499 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX1Q92499 AC145285.6-201ENST00000604632 637 ntBASIC20.15■□□□□ 0.82
DDX1Q92499 AC026471.5-201ENST00000615068 467 ntBASIC20.15■□□□□ 0.82
DDX1Q92499 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX1Q92499 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.15■□□□□ 0.82
DDX1Q92499 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX1Q92499 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
DDX1Q92499 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.15■□□□□ 0.82
DDX1Q92499 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX1Q92499 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
DDX1Q92499 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.15■□□□□ 0.82
DDX1Q92499 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX1Q92499 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
DDX1Q92499 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
DDX1Q92499 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.15■□□□□ 0.82
DDX1Q92499 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DDX1Q92499 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.14■□□□□ 0.81
DDX1Q92499 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX1Q92499 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
DDX1Q92499 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX1Q92499 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX1Q92499 FSCN1P1-201ENST00000568912 1481 ntBASIC20.14■□□□□ 0.81
DDX1Q92499 KRT8P3-201ENST00000519669 1449 ntBASIC20.14■□□□□ 0.81
DDX1Q92499 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.14■□□□□ 0.81
DDX1Q92499 FAM207BP-201ENST00000447172 505 ntBASIC20.14■□□□□ 0.81
DDX1Q92499 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.14■□□□□ 0.81
DDX1Q92499 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.14■□□□□ 0.81
DDX1Q92499 AP000692.2-201ENST00000608391 879 ntBASIC20.14■□□□□ 0.81
DDX1Q92499 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX1Q92499 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DDX1Q92499 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX1Q92499 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX1Q92499 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX1Q92499 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX1Q92499 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX1Q92499 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.13■□□□□ 0.81
DDX1Q92499 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX1Q92499 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX1Q92499 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX1Q92499 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
DDX1Q92499 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX1Q92499 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX1Q92499 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
DDX1Q92499 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX1Q92499 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms