Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 SLC25A6P5-201ENST00000435663 894 ntBASIC12.8□□□□□ -0.36
COPS9Q8WXC6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
COPS9Q8WXC6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS9Q8WXC6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 AC073592.3-201ENST00000625118 1834 ntBASIC12.78□□□□□ -0.36
COPS9Q8WXC6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 AL365209.1-201ENST00000624418 6473 ntBASIC12.78□□□□□ -0.36
COPS9Q8WXC6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 AC010141.2-201ENST00000452426 721 ntBASIC12.78□□□□□ -0.36
COPS9Q8WXC6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 AC079140.4-201ENST00000507448 529 ntBASIC12.78□□□□□ -0.36
COPS9Q8WXC6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC12.78□□□□□ -0.36
COPS9Q8WXC6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COPS9Q8WXC6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COPS9Q8WXC6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
COPS9Q8WXC6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
COPS9Q8WXC6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC12.77□□□□□ -0.36
COPS9Q8WXC6 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms