Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 AC008040.2-201ENST00000461049 708 ntBASIC19.17■□□□□ 0.66
PTCD2Q8WV60 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 AC083906.6-201ENST00000641366 219 ntBASIC19.17■□□□□ 0.66
PTCD2Q8WV60 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTCD2Q8WV60 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 AL031598.1-201ENST00000561511 1773 ntBASIC19.16■□□□□ 0.66
PTCD2Q8WV60 Z98044.1-201ENST00000632503 1764 ntBASIC19.16■□□□□ 0.66
PTCD2Q8WV60 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 B3GAT3P1-201ENST00000471720 806 ntBASIC19.16■□□□□ 0.66
PTCD2Q8WV60 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 AC131212.4-201ENST00000623606 975 ntBASIC19.16■□□□□ 0.66
PTCD2Q8WV60 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.16■□□□□ 0.66
PTCD2Q8WV60 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 AL031985.4-201ENST00000642138 673 ntBASIC19.15■□□□□ 0.66
PTCD2Q8WV60 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCD2Q8WV60 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PTCD2Q8WV60 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PTCD2Q8WV60 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.14■□□□□ 0.66
PTCD2Q8WV60 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
PTCD2Q8WV60 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTCD2Q8WV60 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTCD2Q8WV60 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTCD2Q8WV60 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTCD2Q8WV60 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTCD2Q8WV60 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTCD2Q8WV60 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.14■□□□□ 0.65
PTCD2Q8WV60 MIR6786-201ENST00000616843 113 ntBASIC19.14■□□□□ 0.65
PTCD2Q8WV60 AC133561.5-201ENST00000635547 218 ntBASIC19.14■□□□□ 0.65
PTCD2Q8WV60 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms