Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCHCR1Q8TD31 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 AC009113.1-201ENST00000570267 2443 ntBASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 KRASP1-201ENST00000407852 552 ntBASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 RPPH1-201ENST00000516869 333 ntBASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 AC142381.4-202ENST00000563973 229 ntBASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 FAM197Y4-202ENST00000622692 608 ntBASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 NBPF21P-201ENST00000425093 1451 ntBASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCHCR1Q8TD31 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 AC004264.1-201ENST00000608354 794 ntBASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 AC083906.6-201ENST00000641366 219 ntBASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCHCR1Q8TD31 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms