Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 TERF1P1-201ENST00000311003 1181 ntBASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 RCC2P3-201ENST00000418112 1537 ntBASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.21■□□□□ 0.51
LINC01555Q8NAE3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LINC01555Q8NAE3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
LINC01555Q8NAE3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.21■□□□□ 0.5
LINC01555Q8NAE3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
LINC01555Q8NAE3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 AC006333.2-201ENST00000607957 2099 ntBASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 AC005521.1-201ENST00000393351 872 ntBASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 KRT8P45-201ENST00000414328 1447 ntBASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 AC073508.3-201ENST00000619697 1419 ntBASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01555Q8NAE3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 RCN1P1-201ENST00000400413 996 ntBASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01555Q8NAE3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 AP000974.1-201ENST00000623909 2387 ntBASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 AC068587.9-201ENST00000641814 219 ntBASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01555Q8NAE3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LINC01555Q8NAE3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms