Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF7Q8N684 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF7Q8N684 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF7Q8N684 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF7Q8N684 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF7Q8N684 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF7Q8N684 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
CPSF7Q8N684 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CPSF7Q8N684 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF7Q8N684 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF7Q8N684 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CPSF7Q8N684 POM121L13P-201ENST00000422362 380 ntBASIC18.49■□□□□ 0.55
CPSF7Q8N684 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF7Q8N684 RPPH1-201ENST00000516869 333 ntBASIC18.49■□□□□ 0.55
CPSF7Q8N684 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.49■□□□□ 0.55
CPSF7Q8N684 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CPSF7Q8N684 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.49■□□□□ 0.55
CPSF7Q8N684 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF7Q8N684 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.49■□□□□ 0.55
CPSF7Q8N684 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF7Q8N684 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.49■□□□□ 0.55
CPSF7Q8N684 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF7Q8N684 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CPSF7Q8N684 AC020916.1-201ENST00000587762 1774 ntBASIC18.49■□□□□ 0.55
CPSF7Q8N684 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.49■□□□□ 0.55
CPSF7Q8N684 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
CPSF7Q8N684 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF7Q8N684 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF7Q8N684 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.49■□□□□ 0.55
CPSF7Q8N684 ABALON-201ENST00000629058 1903 ntBASIC18.49■□□□□ 0.55
CPSF7Q8N684 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF7Q8N684 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.49■□□□□ 0.55
CPSF7Q8N684 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPSF7Q8N684 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.49■□□□□ 0.55
CPSF7Q8N684 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CPSF7Q8N684 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF7Q8N684 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF7Q8N684 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF7Q8N684 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CPSF7Q8N684 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.48■□□□□ 0.55
CPSF7Q8N684 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CPSF7Q8N684 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF7Q8N684 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.48■□□□□ 0.55
CPSF7Q8N684 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF7Q8N684 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.48■□□□□ 0.55
CPSF7Q8N684 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CPSF7Q8N684 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF7Q8N684 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF7Q8N684 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.48■□□□□ 0.55
CPSF7Q8N684 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.48■□□□□ 0.55
CPSF7Q8N684 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.48■□□□□ 0.55
CPSF7Q8N684 AC006557.6-201ENST00000623071 864 ntBASIC18.48■□□□□ 0.55
CPSF7Q8N684 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF7Q8N684 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CPSF7Q8N684 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.48■□□□□ 0.55
CPSF7Q8N684 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.48■□□□□ 0.55
CPSF7Q8N684 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF7Q8N684 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.48■□□□□ 0.55
CPSF7Q8N684 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CPSF7Q8N684 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.48■□□□□ 0.55
CPSF7Q8N684 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPSF7Q8N684 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.48■□□□□ 0.55
CPSF7Q8N684 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CPSF7Q8N684 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.47■□□□□ 0.55
CPSF7Q8N684 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.47■□□□□ 0.55
CPSF7Q8N684 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.47■□□□□ 0.55
CPSF7Q8N684 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.47■□□□□ 0.55
CPSF7Q8N684 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 AP000997.3-201ENST00000623333 2250 ntBASIC18.47■□□□□ 0.55
CPSF7Q8N684 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CPSF7Q8N684 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.47■□□□□ 0.55
CPSF7Q8N684 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.47■□□□□ 0.55
CPSF7Q8N684 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.47■□□□□ 0.55
CPSF7Q8N684 UBE2SP1-201ENST00000450587 669 ntBASIC18.47■□□□□ 0.55
CPSF7Q8N684 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 RPS2P4-201ENST00000476944 856 ntBASIC18.47■□□□□ 0.55
CPSF7Q8N684 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.47■□□□□ 0.55
CPSF7Q8N684 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.47■□□□□ 0.55
CPSF7Q8N684 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.47■□□□□ 0.55
CPSF7Q8N684 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.47■□□□□ 0.55
CPSF7Q8N684 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 RN7SL471P-201ENST00000580476 299 ntBASIC18.47■□□□□ 0.55
CPSF7Q8N684 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.47■□□□□ 0.55
CPSF7Q8N684 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPSF7Q8N684 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms