Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 AL023284.2-201ENST00000405850 579 ntBASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 AC113347.1-201ENST00000413321 391 ntBASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
TRAM1L1Q8N609 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 AL512604.3-201ENST00000569583 964 ntBASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAM1L1Q8N609 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 RCC2P3-201ENST00000418112 1537 ntBASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 MCCD1P1-208ENST00000445732 328 ntBASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAM1L1Q8N609 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 AL137013.1-201ENST00000432946 1228 ntBASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAM1L1Q8N609 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms