Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 AC091390.4-202ENST00000476426 537 ntBASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 AC130371.2-201ENST00000619443 611 ntBASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9CQ8N5M4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 AC120498.9-201ENST00000339021 3867 ntBASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 KRT8P11-201ENST00000409686 1436 ntBASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.96□□□□□ -0.01
TTC9CQ8N5M4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TTC9CQ8N5M4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
TTC9CQ8N5M4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.96□□□□□ -0.02
TTC9CQ8N5M4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 FSCN1P1-201ENST00000568912 1481 ntBASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 RPS2P55-201ENST00000397318 883 ntBASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 AC107956.1-201ENST00000494359 873 ntBASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 CD177P1-201ENST00000606252 935 ntBASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 MIR6786-201ENST00000616843 113 ntBASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 AC011298.2-201ENST00000617989 482 ntBASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TTC9CQ8N5M4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms