Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 AC097658.1-201ENST00000475555 843 ntBASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 AL162430.1-201ENST00000480705 870 ntBASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 OR2A1-AS1-207ENST00000486094 819 ntBASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 PNMA6B-201ENST00000538162 1200 ntBASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 MIR4758-201ENST00000577688 71 ntBASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LINC01561Q8N1V8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
LINC01561Q8N1V8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01561Q8N1V8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC12.71□□□□□ -0.38
LINC01561Q8N1V8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01561Q8N1V8 PCDHB18P-201ENST00000524813 2368 ntBASIC12.71□□□□□ -0.38
LINC01561Q8N1V8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01561Q8N1V8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC01561Q8N1V8 AC104581.1-202ENST00000635932 2618 ntBASIC12.71□□□□□ -0.38
LINC01561Q8N1V8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01561Q8N1V8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
LINC01561Q8N1V8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
LINC01561Q8N1V8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
LINC01561Q8N1V8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 SLC25A6P5-201ENST00000435663 894 ntBASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 TSPY23P-201ENST00000440136 739 ntBASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 RARRES2P6-201ENST00000567333 442 ntBASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 AC022517.1-201ENST00000592429 346 ntBASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01561Q8N1V8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
LINC01561Q8N1V8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms