Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 AC093484.2-201ENST00000580996 2166 ntBASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 RNF152P1-201ENST00000397754 604 ntBASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 AC011558.1-201ENST00000623459 338 ntBASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN4BQ8IWT1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 GPAT2P1-201ENST00000444924 1672 ntBASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 AC009947.2-201ENST00000444014 672 ntBASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.95■□□□□ 0.78
SCN4BQ8IWT1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 AL032819.2-201ENST00000624543 2162 ntBASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 TSPY5P-201ENST00000426936 936 ntBASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 AC022616.7-201ENST00000525383 220 ntBASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 AC087388.1-201ENST00000571370 1112 ntBASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
SCN4BQ8IWT1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 IRX1P1-201ENST00000438849 1838 ntBASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms