Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CRLF3Q8IUI8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CRLF3Q8IUI8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.9■□□□□ 0.62
CRLF3Q8IUI8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.9■□□□□ 0.62
CRLF3Q8IUI8 AC060766.5-201ENST00000590539 871 ntBASIC18.9■□□□□ 0.62
CRLF3Q8IUI8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.9■□□□□ 0.62
CRLF3Q8IUI8 HLA-B-256ENST00000639848 1089 ntBASIC18.9■□□□□ 0.62
CRLF3Q8IUI8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.9■□□□□ 0.62
CRLF3Q8IUI8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CRLF3Q8IUI8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CRLF3Q8IUI8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CRLF3Q8IUI8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.9■□□□□ 0.62
CRLF3Q8IUI8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CRLF3Q8IUI8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CRLF3Q8IUI8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CRLF3Q8IUI8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CRLF3Q8IUI8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CRLF3Q8IUI8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CRLF3Q8IUI8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CRLF3Q8IUI8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.89■□□□□ 0.62
CRLF3Q8IUI8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CRLF3Q8IUI8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CRLF3Q8IUI8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CRLF3Q8IUI8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 AC104417.2-201ENST00000562989 1793 ntBASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CRLF3Q8IUI8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CRLF3Q8IUI8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.87■□□□□ 0.61
CRLF3Q8IUI8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CRLF3Q8IUI8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.87■□□□□ 0.61
CRLF3Q8IUI8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CRLF3Q8IUI8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CRLF3Q8IUI8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CRLF3Q8IUI8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CRLF3Q8IUI8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CRLF3Q8IUI8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.87■□□□□ 0.61
CRLF3Q8IUI8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CRLF3Q8IUI8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CRLF3Q8IUI8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.87■□□□□ 0.61
CRLF3Q8IUI8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CRLF3Q8IUI8 LTB4R2-202ENST00000528054 3092 ntBASIC18.87■□□□□ 0.61
CRLF3Q8IUI8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms