Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RAB43Q86YS6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
RAB43Q86YS6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAB43Q86YS6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.06■□□□□ 0.48
RAB43Q86YS6 AC010653.2-201ENST00000623505 997 ntBASIC18.06■□□□□ 0.48
RAB43Q86YS6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.06■□□□□ 0.48
RAB43Q86YS6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB43Q86YS6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.06■□□□□ 0.48
RAB43Q86YS6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAB43Q86YS6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB43Q86YS6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.06■□□□□ 0.48
RAB43Q86YS6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB43Q86YS6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.06■□□□□ 0.48
RAB43Q86YS6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB43Q86YS6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RAB43Q86YS6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RAB43Q86YS6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.05■□□□□ 0.48
RAB43Q86YS6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAB43Q86YS6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB43Q86YS6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.05■□□□□ 0.48
RAB43Q86YS6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAB43Q86YS6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RAB43Q86YS6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB43Q86YS6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB43Q86YS6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB43Q86YS6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RAB43Q86YS6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.05■□□□□ 0.48
RAB43Q86YS6 AC104076.2-201ENST00000448912 469 ntBASIC18.05■□□□□ 0.48
RAB43Q86YS6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.05■□□□□ 0.48
RAB43Q86YS6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.05■□□□□ 0.48
RAB43Q86YS6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.05■□□□□ 0.48
RAB43Q86YS6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB43Q86YS6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.05■□□□□ 0.48
RAB43Q86YS6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB43Q86YS6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RAB43Q86YS6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RAB43Q86YS6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.05■□□□□ 0.48
RAB43Q86YS6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.05■□□□□ 0.48
RAB43Q86YS6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAB43Q86YS6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB43Q86YS6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAB43Q86YS6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB43Q86YS6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB43Q86YS6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB43Q86YS6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB43Q86YS6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB43Q86YS6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB43Q86YS6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB43Q86YS6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB43Q86YS6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB43Q86YS6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB43Q86YS6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB43Q86YS6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
RAB43Q86YS6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB43Q86YS6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB43Q86YS6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.04■□□□□ 0.48
RAB43Q86YS6 TSPY17P-201ENST00000450329 467 ntBASIC18.04■□□□□ 0.48
RAB43Q86YS6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.04■□□□□ 0.48
RAB43Q86YS6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB43Q86YS6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB43Q86YS6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB43Q86YS6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RAB43Q86YS6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB43Q86YS6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB43Q86YS6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB43Q86YS6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RAB43Q86YS6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB43Q86YS6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB43Q86YS6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RAB43Q86YS6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB43Q86YS6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB43Q86YS6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB43Q86YS6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB43Q86YS6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.03■□□□□ 0.48
RAB43Q86YS6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB43Q86YS6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB43Q86YS6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB43Q86YS6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB43Q86YS6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RAB43Q86YS6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB43Q86YS6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB43Q86YS6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB43Q86YS6 AK4P3-201ENST00000418260 669 ntBASIC18.03■□□□□ 0.48
RAB43Q86YS6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB43Q86YS6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB43Q86YS6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
RAB43Q86YS6 AL512604.3-201ENST00000569583 964 ntBASIC18.03■□□□□ 0.48
RAB43Q86YS6 AC087388.1-201ENST00000571370 1112 ntBASIC18.03■□□□□ 0.48
RAB43Q86YS6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.03■□□□□ 0.48
RAB43Q86YS6 NTF6B-201ENST00000591913 560 ntBASIC18.03■□□□□ 0.48
RAB43Q86YS6 AC006011.2-201ENST00000621313 1158 ntBASIC18.03■□□□□ 0.48
RAB43Q86YS6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB43Q86YS6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB43Q86YS6 AL162377.1-201ENST00000618844 1793 ntBASIC18.03■□□□□ 0.48
RAB43Q86YS6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB43Q86YS6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB43Q86YS6 AC009237.14-201ENST00000609975 1594 ntBASIC18.03■□□□□ 0.48
RAB43Q86YS6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB43Q86YS6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB43Q86YS6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms