Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 TMPOP1-202ENST00000424642 1267 ntBASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 MIR4674-201ENST00000582457 87 ntBASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRTM4Q86VH4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 GPAT2P1-201ENST00000444924 1672 ntBASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM4Q86VH4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 AL161938.1-201ENST00000569833 2180 ntBASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 AL023284.2-201ENST00000405850 579 ntBASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 AL138966.2-201ENST00000621997 464 ntBASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 KRT8P45-201ENST00000414328 1447 ntBASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM4Q86VH4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 AL512353.2-201ENST00000448759 1962 ntBASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms