Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
DENND4AQ7Z401 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DENND4AQ7Z401 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
DENND4AQ7Z401 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DENND4AQ7Z401 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.47■□□□□ 0.71
DENND4AQ7Z401 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DENND4AQ7Z401 AC104390.1-201ENST00000555663 520 ntBASIC19.47■□□□□ 0.71
DENND4AQ7Z401 AL121772.3-201ENST00000610840 674 ntBASIC19.47■□□□□ 0.71
DENND4AQ7Z401 AL592071.1-201ENST00000611956 408 ntBASIC19.47■□□□□ 0.71
DENND4AQ7Z401 AC006538.3-201ENST00000612495 578 ntBASIC19.47■□□□□ 0.71
DENND4AQ7Z401 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DENND4AQ7Z401 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DENND4AQ7Z401 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DENND4AQ7Z401 LINC01521-201ENST00000504184 1943 ntBASIC19.47■□□□□ 0.71
DENND4AQ7Z401 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.47■□□□□ 0.71
DENND4AQ7Z401 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DENND4AQ7Z401 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 Z83836.1-201ENST00000624605 1642 ntBASIC19.46■□□□□ 0.71
DENND4AQ7Z401 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 SAPCD2P3-201ENST00000455031 850 ntBASIC19.46■□□□□ 0.71
DENND4AQ7Z401 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 AL391422.3-201ENST00000603791 2761 ntBASIC19.46■□□□□ 0.71
DENND4AQ7Z401 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DENND4AQ7Z401 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.7
DENND4AQ7Z401 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.45■□□□□ 0.7
DENND4AQ7Z401 REXO1L6P-202ENST00000619970 1078 ntBASIC19.45■□□□□ 0.7
DENND4AQ7Z401 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 KRT18P23-201ENST00000435622 1283 ntBASIC19.45■□□□□ 0.7
DENND4AQ7Z401 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.45■□□□□ 0.7
DENND4AQ7Z401 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
DENND4AQ7Z401 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms