Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 AC009269.2-201ENST00000559892 474 ntBASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 BNIP3P27-201ENST00000599991 412 ntBASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 AL392048.1-201ENST00000613946 534 ntBASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.79■■□□□ 1.08
PPP4R3CPQ6ZMV5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 LINC01198-206ENST00000595532 1125 ntBASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 AL118508.4-201ENST00000624142 1176 ntBASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R3CPQ6ZMV5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 AL589826.1-201ENST00000340697 249 ntBASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 SCAND3P1-201ENST00000439854 1060 ntBASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 RPL5P23-201ENST00000496040 868 ntBASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 AC027020.1-201ENST00000559349 632 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 AC012467.1-201ENST00000607740 256 ntBASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 AC090116.1-201ENST00000615679 446 ntBASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R3CPQ6ZMV5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 AL359641.1-201ENST00000412509 1558 ntBASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 AL590240.2-201ENST00000413370 894 ntBASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 RPS2P4-201ENST00000476944 856 ntBASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 AL132996.1-201ENST00000569865 1431 ntTSL 5 BASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 AP000842.4-201ENST00000638781 748 ntBASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 PROCR-201ENST00000216968 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms