Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.71■■□□□ 1.07
PDZRN4Q6ZMN7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.71■■□□□ 1.07
PDZRN4Q6ZMN7 RPS2P4-201ENST00000476944 856 ntBASIC21.71■■□□□ 1.07
PDZRN4Q6ZMN7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.71■■□□□ 1.07
PDZRN4Q6ZMN7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PDZRN4Q6ZMN7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.71■■□□□ 1.07
PDZRN4Q6ZMN7 AC005829.2-201ENST00000571422 1056 ntBASIC21.71■■□□□ 1.07
PDZRN4Q6ZMN7 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.71■■□□□ 1.07
PDZRN4Q6ZMN7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.71■■□□□ 1.07
PDZRN4Q6ZMN7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN4Q6ZMN7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN4Q6ZMN7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN4Q6ZMN7 BCL2-203ENST00000589955 5011 ntBASIC21.71■■□□□ 1.07
PDZRN4Q6ZMN7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN4Q6ZMN7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PDZRN4Q6ZMN7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.07
PDZRN4Q6ZMN7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.7■■□□□ 1.07
PDZRN4Q6ZMN7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
PDZRN4Q6ZMN7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PDZRN4Q6ZMN7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN4Q6ZMN7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC21.7■■□□□ 1.06
PDZRN4Q6ZMN7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN4Q6ZMN7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN4Q6ZMN7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN4Q6ZMN7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN4Q6ZMN7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN4Q6ZMN7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.7■■□□□ 1.06
PDZRN4Q6ZMN7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN4Q6ZMN7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.7■■□□□ 1.06
PDZRN4Q6ZMN7 FAM197Y4-202ENST00000622692 608 ntBASIC21.7■■□□□ 1.06
PDZRN4Q6ZMN7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
PDZRN4Q6ZMN7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.7■■□□□ 1.06
PDZRN4Q6ZMN7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN4Q6ZMN7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
PDZRN4Q6ZMN7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN4Q6ZMN7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN4Q6ZMN7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 AC008550.1-201ENST00000511500 884 ntBASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 TNRC18P3-201ENST00000441896 2691 ntBASIC21.68■■□□□ 1.06
PDZRN4Q6ZMN7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDZRN4Q6ZMN7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms