Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 AC026366.1-201ENST00000488803 879 ntBASIC19.32■□□□□ 0.68
CASC4Q6P4E1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 AL160286.2-201ENST00000567150 934 ntBASIC19.32■□□□□ 0.68
CASC4Q6P4E1 C1QL1P1-201ENST00000568105 661 ntBASIC19.32■□□□□ 0.68
CASC4Q6P4E1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.32■□□□□ 0.68
CASC4Q6P4E1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 OR6D1P-202ENST00000641007 5290 ntBASIC19.31■□□□□ 0.68
CASC4Q6P4E1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 MTDHP1-201ENST00000605323 784 ntBASIC19.31■□□□□ 0.68
CASC4Q6P4E1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.31■□□□□ 0.68
CASC4Q6P4E1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 AC233263.1-201ENST00000578059 224 ntBASIC19.3■□□□□ 0.68
CASC4Q6P4E1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 HLA-A-209ENST00000638375 975 ntBASIC19.3■□□□□ 0.68
CASC4Q6P4E1 AL023875.1-201ENST00000640777 796 ntBASIC19.3■□□□□ 0.68
CASC4Q6P4E1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASC4Q6P4E1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 AC239809.2-201ENST00000415381 517 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms