Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 AC126763.1-201ENST00000552015 2118 ntBASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 AL162741.1-201ENST00000565563 1558 ntBASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRIF1Q5T3J3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 AC142086.2-201ENST00000569753 217 ntBASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.86■□□□□ 0.45
LRIF1Q5T3J3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 RCC2P6-201ENST00000526625 1557 ntBASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.85■□□□□ 0.45
LRIF1Q5T3J3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 UNC93B5-201ENST00000530315 699 ntBASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 AC004264.1-201ENST00000608354 794 ntBASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 AL109923.1-201ENST00000618799 583 ntBASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LRIF1Q5T3J3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRIF1Q5T3J3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRIF1Q5T3J3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRIF1Q5T3J3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRIF1Q5T3J3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRIF1Q5T3J3 MTMR9LP-203ENST00000426597 1545 ntBASIC17.83■□□□□ 0.45
LRIF1Q5T3J3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRIF1Q5T3J3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms