Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC9.52□□□□□ -0.89
LINC01554Q52M75 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC9.52□□□□□ -0.89
LINC01554Q52M75 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC9.52□□□□□ -0.89
LINC01554Q52M75 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC01554Q52M75 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 AC135050.7-201ENST00000624508 2218 ntBASIC9.51□□□□□ -0.89
LINC01554Q52M75 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 COMP-202ENST00000425807 2292 ntTSL 2 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 AC010141.3-201ENST00000456659 717 ntBASIC9.51□□□□□ -0.89
LINC01554Q52M75 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 AL031602.1-201ENST00000633169 911 ntBASIC9.51□□□□□ -0.89
LINC01554Q52M75 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 STX4-202ENST00000394998 1498 ntTSL 2 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 GTSE1-AS1-202ENST00000623117 1518 ntBASIC9.51□□□□□ -0.89
LINC01554Q52M75 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC01554Q52M75 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC9.51□□□□□ -0.89
LINC01554Q52M75 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
LINC01554Q52M75 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC9.5□□□□□ -0.89
LINC01554Q52M75 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01554Q52M75 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC9.5□□□□□ -0.89
LINC01554Q52M75 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC9.5□□□□□ -0.89
LINC01554Q52M75 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
LINC01554Q52M75 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC9.5□□□□□ -0.89
LINC01554Q52M75 AL671710.1-201ENST00000610245 2349 ntBASIC9.5□□□□□ -0.89
LINC01554Q52M75 ME2-216ENST00000639850 2331 ntTSL 5 BASIC9.5□□□□□ -0.89
LINC01554Q52M75 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01554Q52M75 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01554Q52M75 AL049796.1-201ENST00000565336 1766 ntBASIC9.5□□□□□ -0.89
LINC01554Q52M75 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01554Q52M75 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01554Q52M75 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01554Q52M75 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
LINC01554Q52M75 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01554Q52M75 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01554Q52M75 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01554Q52M75 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01554Q52M75 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01554Q52M75 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC9.5□□□□□ -0.89
LINC01554Q52M75 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC9.5□□□□□ -0.89
LINC01554Q52M75 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC9.5□□□□□ -0.89
LINC01554Q52M75 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LINC01554Q52M75 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms