Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 AL390955.1-201ENST00000428694 934 ntBASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 KRT17P2-201ENST00000300992 1314 ntBASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 AL031598.1-201ENST00000561511 1773 ntBASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN20Q4JDL3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN20Q4JDL3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN20Q4JDL3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN20Q4JDL3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN20Q4JDL3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN20Q4JDL3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.91■□□□□ 0.78
PTPN20Q4JDL3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN20Q4JDL3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PTPN20Q4JDL3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.91■□□□□ 0.78
PTPN20Q4JDL3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.91■□□□□ 0.78
PTPN20Q4JDL3 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.91■□□□□ 0.78
PTPN20Q4JDL3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PTPN20Q4JDL3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN20Q4JDL3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN20Q4JDL3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN20Q4JDL3 KRT8P32-201ENST00000512863 1461 ntBASIC19.91■□□□□ 0.78
PTPN20Q4JDL3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN20Q4JDL3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN20Q4JDL3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 FITM1-202ENST00000559294 800 ntBASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 AC008622.2-201ENST00000617006 1229 ntBASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 AC068587.9-201ENST00000641814 219 ntBASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 HEIH-201ENST00000623091 1652 ntBASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN20Q4JDL3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
PTPN20Q4JDL3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.89■□□□□ 0.78
PTPN20Q4JDL3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
PTPN20Q4JDL3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PTPN20Q4JDL3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN20Q4JDL3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN20Q4JDL3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN20Q4JDL3 MIR1238-201ENST00000408483 83 ntBASIC19.89■□□□□ 0.77
PTPN20Q4JDL3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.89■□□□□ 0.77
PTPN20Q4JDL3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN20Q4JDL3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN20Q4JDL3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms