Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CERKLQ49MI3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
CERKLQ49MI3 AC034232.1-201ENST00000506026 1064 ntBASIC22.16■■□□□ 1.14
CERKLQ49MI3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC22.16■■□□□ 1.14
CERKLQ49MI3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CERKLQ49MI3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC22.16■■□□□ 1.14
CERKLQ49MI3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC22.16■■□□□ 1.14
CERKLQ49MI3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CERKLQ49MI3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.16■■□□□ 1.14
CERKLQ49MI3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CERKLQ49MI3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CERKLQ49MI3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.16■■□□□ 1.14
CERKLQ49MI3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.15■■□□□ 1.14
CERKLQ49MI3 FEM1AP3-201ENST00000403722 1741 ntBASIC22.15■■□□□ 1.14
CERKLQ49MI3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CERKLQ49MI3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.15■■□□□ 1.14
CERKLQ49MI3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CERKLQ49MI3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CERKLQ49MI3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CERKLQ49MI3 FXN-203ENST00000396366 922 ntTSL 2 BASIC22.15■■□□□ 1.14
CERKLQ49MI3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC22.15■■□□□ 1.14
CERKLQ49MI3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC22.15■■□□□ 1.14
CERKLQ49MI3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CERKLQ49MI3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.15■■□□□ 1.14
CERKLQ49MI3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.15■■□□□ 1.14
CERKLQ49MI3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CERKLQ49MI3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.15■■□□□ 1.14
CERKLQ49MI3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CERKLQ49MI3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.15■■□□□ 1.14
CERKLQ49MI3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.15■■□□□ 1.14
CERKLQ49MI3 KATNBL1P6-202ENST00000562413 1466 ntBASIC22.15■■□□□ 1.14
CERKLQ49MI3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CERKLQ49MI3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CERKLQ49MI3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CERKLQ49MI3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CERKLQ49MI3 AL512353.2-201ENST00000448759 1962 ntBASIC22.14■■□□□ 1.14
CERKLQ49MI3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CERKLQ49MI3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC22.14■■□□□ 1.14
CERKLQ49MI3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CERKLQ49MI3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CERKLQ49MI3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CERKLQ49MI3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC22.14■■□□□ 1.13
CERKLQ49MI3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CERKLQ49MI3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC22.14■■□□□ 1.13
CERKLQ49MI3 GRAMD4P1-201ENST00000435181 1110 ntBASIC22.14■■□□□ 1.13
CERKLQ49MI3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CERKLQ49MI3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC22.14■■□□□ 1.13
CERKLQ49MI3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC22.14■■□□□ 1.13
CERKLQ49MI3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CERKLQ49MI3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CERKLQ49MI3 AC093458.2-201ENST00000623150 629 ntBASIC22.14■■□□□ 1.13
CERKLQ49MI3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CERKLQ49MI3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CERKLQ49MI3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CERKLQ49MI3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC22.14■■□□□ 1.13
CERKLQ49MI3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.14■■□□□ 1.13
CERKLQ49MI3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.14■■□□□ 1.13
CERKLQ49MI3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CERKLQ49MI3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CERKLQ49MI3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CERKLQ49MI3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CERKLQ49MI3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CERKLQ49MI3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CERKLQ49MI3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CERKLQ49MI3 RCC2P3-201ENST00000418112 1537 ntBASIC22.13■■□□□ 1.13
CERKLQ49MI3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC22.13■■□□□ 1.13
CERKLQ49MI3 HBZP1-201ENST00000354915 429 ntBASIC22.13■■□□□ 1.13
CERKLQ49MI3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CERKLQ49MI3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC22.13■■□□□ 1.13
CERKLQ49MI3 AC092597.1-201ENST00000487352 616 ntBASIC22.13■■□□□ 1.13
CERKLQ49MI3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CERKLQ49MI3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CERKLQ49MI3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CERKLQ49MI3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CERKLQ49MI3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CERKLQ49MI3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CERKLQ49MI3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CERKLQ49MI3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.13■■□□□ 1.13
CERKLQ49MI3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
CERKLQ49MI3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC22.12■■□□□ 1.13
CERKLQ49MI3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
CERKLQ49MI3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CERKLQ49MI3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC22.12■■□□□ 1.13
CERKLQ49MI3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CERKLQ49MI3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.12■■□□□ 1.13
CERKLQ49MI3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CERKLQ49MI3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CERKLQ49MI3 AL109659.2-201ENST00000606809 1674 ntBASIC22.12■■□□□ 1.13
CERKLQ49MI3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CERKLQ49MI3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC22.12■■□□□ 1.13
CERKLQ49MI3 SPDYE13P-201ENST00000445314 798 ntBASIC22.12■■□□□ 1.13
CERKLQ49MI3 SEC1P-202ENST00000473944 940 ntBASIC22.12■■□□□ 1.13
CERKLQ49MI3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC22.12■■□□□ 1.13
CERKLQ49MI3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC22.12■■□□□ 1.13
CERKLQ49MI3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.12■■□□□ 1.13
CERKLQ49MI3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC22.12■■□□□ 1.13
CERKLQ49MI3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC22.12■■□□□ 1.13
CERKLQ49MI3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC22.12■■□□□ 1.13
CERKLQ49MI3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CERKLQ49MI3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms