Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 AC112497.1-201ENST00000624824 639 ntBASIC20.66■□□□□ 0.9
CDC42EP1Q00587 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.66■□□□□ 0.9
CDC42EP1Q00587 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 RCC2P3-201ENST00000418112 1537 ntBASIC20.65■□□□□ 0.9
CDC42EP1Q00587 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 PCED1CP-201ENST00000419887 785 ntBASIC20.65■□□□□ 0.9
CDC42EP1Q00587 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP1Q00587 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CDC42EP1Q00587 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CDC42EP1Q00587 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDC42EP1Q00587 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDC42EP1Q00587 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42EP1Q00587 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42EP1Q00587 RASA4DP-201ENST00000460726 1199 ntBASIC20.64■□□□□ 0.89
CDC42EP1Q00587 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42EP1Q00587 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.64■□□□□ 0.89
CDC42EP1Q00587 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42EP1Q00587 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CDC42EP1Q00587 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42EP1Q00587 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CDC42EP1Q00587 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42EP1Q00587 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 HOXB1-202ENST00000577092 1414 ntBASIC20.63■□□□□ 0.89
CDC42EP1Q00587 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 ZNF444P1-201ENST00000559497 298 ntBASIC20.63■□□□□ 0.89
CDC42EP1Q00587 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.63■□□□□ 0.89
CDC42EP1Q00587 AC024243.1-201ENST00000609234 778 ntBASIC20.63■□□□□ 0.89
CDC42EP1Q00587 HYMAI.1-201ENST00000620949 238 ntBASIC20.63■□□□□ 0.89
CDC42EP1Q00587 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CDC42EP1Q00587 LINC01311-201ENST00000565162 1445 ntBASIC20.62■□□□□ 0.89
CDC42EP1Q00587 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42EP1Q00587 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42EP1Q00587 PCDHAC2-203ENST00000615316 3011 ntBASIC20.62■□□□□ 0.89
CDC42EP1Q00587 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42EP1Q00587 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42EP1Q00587 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42EP1Q00587 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42EP1Q00587 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CDC42EP1Q00587 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CDC42EP1Q00587 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42EP1Q00587 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42EP1Q00587 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42EP1Q00587 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.62■□□□□ 0.89
CDC42EP1Q00587 MIR564-202ENST00000385049 94 ntBASIC20.62■□□□□ 0.89
CDC42EP1Q00587 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.62■□□□□ 0.89
CDC42EP1Q00587 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42EP1Q00587 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.62■□□□□ 0.89
CDC42EP1Q00587 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.62■□□□□ 0.89
CDC42EP1Q00587 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.62■□□□□ 0.89
CDC42EP1Q00587 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42EP1Q00587 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms