Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AL158047.1-201ENST00000445918 881 ntBASIC16.55■□□□□ 0.24
HIST1H3AP68431 FAM207BP-201ENST00000447172 505 ntBASIC16.55■□□□□ 0.24
HIST1H3AP68431 AC116562.2-201ENST00000507042 360 ntBASIC16.55■□□□□ 0.24
HIST1H3AP68431 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HIST1H3AP68431 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.55■□□□□ 0.24
HIST1H3AP68431 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.55■□□□□ 0.24
HIST1H3AP68431 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.55■□□□□ 0.24
HIST1H3AP68431 AP000692.2-201ENST00000608391 879 ntBASIC16.55■□□□□ 0.24
HIST1H3AP68431 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.55■□□□□ 0.24
HIST1H3AP68431 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H3AP68431 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H3AP68431 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H3AP68431 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H3AP68431 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H3AP68431 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H3AP68431 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H3AP68431 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H3AP68431 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H3AP68431 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H3AP68431 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 AC233702.5-201ENST00000584107 538 ntBASIC16.54■□□□□ 0.24
HIST1H3AP68431 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H3AP68431 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H3AP68431 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H3AP68431 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H3AP68431 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H3AP68431 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H3AP68431 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 KRT8P32-201ENST00000512863 1461 ntBASIC16.54■□□□□ 0.24
HIST1H3AP68431 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.54■□□□□ 0.24
HIST1H3AP68431 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.54■□□□□ 0.24
HIST1H3AP68431 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H3AP68431 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H3AP68431 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H3AP68431 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H3AP68431 HEIH-201ENST00000623091 1652 ntBASIC16.53■□□□□ 0.24
HIST1H3AP68431 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H3AP68431 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H3AP68431 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H3AP68431 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.53■□□□□ 0.24
HIST1H3AP68431 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HIST1H3AP68431 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H3AP68431 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HIST1H3AP68431 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HIST1H3AP68431 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H3AP68431 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.53■□□□□ 0.24
HIST1H3AP68431 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HIST1H3AP68431 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.53■□□□□ 0.24
HIST1H3AP68431 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H3AP68431 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.53■□□□□ 0.24
HIST1H3AP68431 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H3AP68431 NUDT16P1-203ENST00000513809 620 ntBASIC16.53■□□□□ 0.24
HIST1H3AP68431 AP001412.1-201ENST00000608405 714 ntBASIC16.53■□□□□ 0.24
HIST1H3AP68431 AC068587.9-201ENST00000641814 219 ntBASIC16.53■□□□□ 0.24
HIST1H3AP68431 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H3AP68431 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H3AP68431 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H3AP68431 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H3AP68431 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.53■□□□□ 0.24
HIST1H3AP68431 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.53■□□□□ 0.24
HIST1H3AP68431 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.53■□□□□ 0.24
HIST1H3AP68431 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H3AP68431 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.52■□□□□ 0.24
HIST1H3AP68431 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.52■□□□□ 0.24
HIST1H3AP68431 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.52■□□□□ 0.24
HIST1H3AP68431 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H3AP68431 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H3AP68431 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.52■□□□□ 0.24
HIST1H3AP68431 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H3AP68431 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H3AP68431 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.52■□□□□ 0.24
HIST1H3AP68431 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.52■□□□□ 0.24
HIST1H3AP68431 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.52■□□□□ 0.24
HIST1H3AP68431 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H3AP68431 AC113410.3-201ENST00000623366 203 ntBASIC16.52■□□□□ 0.24
HIST1H3AP68431 AL049637.2-201ENST00000641778 930 ntBASIC16.52■□□□□ 0.24
HIST1H3AP68431 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H3AP68431 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
HIST1H3AP68431 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIST1H3AP68431 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.52■□□□□ 0.23
HIST1H3AP68431 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
HIST1H3AP68431 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.51■□□□□ 0.23
HIST1H3AP68431 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms