Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 UBE2SP1-201ENST00000450587 669 ntBASIC16.93■□□□□ 0.3
CLRN1P58418 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.93■□□□□ 0.3
CLRN1P58418 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.93■□□□□ 0.3
CLRN1P58418 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CLRN1P58418 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLRN1P58418 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLRN1P58418 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CLRN1P58418 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLRN1P58418 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLRN1P58418 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLRN1P58418 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLRN1P58418 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLRN1P58418 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLRN1P58418 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLRN1P58418 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLRN1P58418 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLRN1P58418 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLRN1P58418 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLRN1P58418 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.92■□□□□ 0.3
CLRN1P58418 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLRN1P58418 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLRN1P58418 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.92■□□□□ 0.3
CLRN1P58418 AC006333.2-201ENST00000607957 2099 ntBASIC16.92■□□□□ 0.3
CLRN1P58418 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CLRN1P58418 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.92■□□□□ 0.3
CLRN1P58418 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLRN1P58418 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLRN1P58418 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLRN1P58418 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.92■□□□□ 0.3
CLRN1P58418 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLRN1P58418 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLRN1P58418 ABHD17AP1-201ENST00000358206 933 ntBASIC16.92■□□□□ 0.3
CLRN1P58418 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CLRN1P58418 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLRN1P58418 AC004951.3-201ENST00000418645 1148 ntBASIC16.92■□□□□ 0.3
CLRN1P58418 GCSHP5-201ENST00000443090 522 ntBASIC16.92■□□□□ 0.3
CLRN1P58418 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.92■□□□□ 0.3
CLRN1P58418 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CLRN1P58418 AC026271.3-201ENST00000571884 352 ntBASIC16.92■□□□□ 0.3
CLRN1P58418 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CLRN1P58418 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.92■□□□□ 0.3
CLRN1P58418 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.92■□□□□ 0.3
CLRN1P58418 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.92■□□□□ 0.3
CLRN1P58418 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.92■□□□□ 0.3
CLRN1P58418 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLRN1P58418 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLRN1P58418 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLRN1P58418 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CLRN1P58418 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLRN1P58418 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.92■□□□□ 0.3
CLRN1P58418 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLRN1P58418 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.92■□□□□ 0.3
CLRN1P58418 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CLRN1P58418 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CLRN1P58418 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLRN1P58418 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLRN1P58418 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CLRN1P58418 RCC2P6-201ENST00000526625 1557 ntBASIC16.91■□□□□ 0.3
CLRN1P58418 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.91■□□□□ 0.3
CLRN1P58418 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLRN1P58418 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLRN1P58418 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.91■□□□□ 0.3
CLRN1P58418 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.91■□□□□ 0.3
CLRN1P58418 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLRN1P58418 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.91■□□□□ 0.3
CLRN1P58418 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.91■□□□□ 0.3
CLRN1P58418 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLRN1P58418 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.91■□□□□ 0.3
CLRN1P58418 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CLRN1P58418 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLRN1P58418 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.91■□□□□ 0.3
CLRN1P58418 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.91■□□□□ 0.3
CLRN1P58418 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLRN1P58418 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CLRN1P58418 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLRN1P58418 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLRN1P58418 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLRN1P58418 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLRN1P58418 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CLRN1P58418 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLRN1P58418 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLRN1P58418 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLRN1P58418 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLRN1P58418 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLRN1P58418 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLRN1P58418 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CLRN1P58418 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
CLRN1P58418 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CLRN1P58418 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLRN1P58418 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLRN1P58418 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLRN1P58418 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.9■□□□□ 0.3
CLRN1P58418 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLRN1P58418 AC011298.2-201ENST00000617989 482 ntBASIC16.9■□□□□ 0.3
CLRN1P58418 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.9■□□□□ 0.3
CLRN1P58418 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLRN1P58418 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLRN1P58418 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLRN1P58418 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.9■□□□□ 0.3
CLRN1P58418 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms