Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDH6P55285 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CDH6P55285 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH6P55285 AL138781.2-201ENST00000617896 1843 ntBASIC19.69■□□□□ 0.74
CDH6P55285 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH6P55285 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH6P55285 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH6P55285 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH6P55285 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH6P55285 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH6P55285 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH6P55285 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH6P55285 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH6P55285 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
CDH6P55285 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH6P55285 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH6P55285 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH6P55285 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH6P55285 AC008040.2-201ENST00000461049 708 ntBASIC19.69■□□□□ 0.74
CDH6P55285 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.69■□□□□ 0.74
CDH6P55285 PRSS44-201ENST00000515154 1146 ntBASIC19.69■□□□□ 0.74
CDH6P55285 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH6P55285 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.69■□□□□ 0.74
CDH6P55285 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH6P55285 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH6P55285 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH6P55285 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH6P55285 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CDH6P55285 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH6P55285 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH6P55285 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH6P55285 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH6P55285 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH6P55285 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH6P55285 AL512353.2-201ENST00000448759 1962 ntBASIC19.68■□□□□ 0.74
CDH6P55285 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH6P55285 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH6P55285 AL031598.1-201ENST00000561511 1773 ntBASIC19.68■□□□□ 0.74
CDH6P55285 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH6P55285 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
CDH6P55285 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH6P55285 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH6P55285 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CDH6P55285 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CDH6P55285 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CDH6P55285 AC011506.1-201ENST00000474329 610 ntBASIC19.68■□□□□ 0.74
CDH6P55285 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.68■□□□□ 0.74
CDH6P55285 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH6P55285 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.68■□□□□ 0.74
CDH6P55285 CD177P1-201ENST00000606252 935 ntBASIC19.68■□□□□ 0.74
CDH6P55285 AC083906.6-201ENST00000641366 219 ntBASIC19.68■□□□□ 0.74
CDH6P55285 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CDH6P55285 AC093525.10-201ENST00000625130 1569 ntBASIC19.68■□□□□ 0.74
CDH6P55285 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH6P55285 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH6P55285 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH6P55285 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH6P55285 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH6P55285 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH6P55285 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH6P55285 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH6P55285 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH6P55285 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH6P55285 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH6P55285 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH6P55285 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH6P55285 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH6P55285 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CDH6P55285 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH6P55285 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH6P55285 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH6P55285 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH6P55285 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH6P55285 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CDH6P55285 AC012618.2-201ENST00000428058 849 ntBASIC19.67■□□□□ 0.74
CDH6P55285 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH6P55285 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH6P55285 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH6P55285 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.67■□□□□ 0.74
CDH6P55285 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH6P55285 MIR6786-201ENST00000616843 113 ntBASIC19.67■□□□□ 0.74
CDH6P55285 AC130371.2-201ENST00000619443 611 ntBASIC19.67■□□□□ 0.74
CDH6P55285 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH6P55285 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
CDH6P55285 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH6P55285 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH6P55285 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.67■□□□□ 0.74
CDH6P55285 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CDH6P55285 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
CDH6P55285 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH6P55285 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH6P55285 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH6P55285 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH6P55285 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH6P55285 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH6P55285 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH6P55285 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH6P55285 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH6P55285 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH6P55285 Z98044.1-201ENST00000632503 1764 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms