Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
APOC4P55056 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.88□□□□□ -0.19
APOC4P55056 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
APOC4P55056 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
APOC4P55056 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
APOC4P55056 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 RNF152P1-201ENST00000397754 604 ntBASIC13.88□□□□□ -0.19
APOC4P55056 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.88□□□□□ -0.19
APOC4P55056 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC4P55056 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.88□□□□□ -0.19
APOC4P55056 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.88□□□□□ -0.19
APOC4P55056 AL138966.2-201ENST00000621997 464 ntBASIC13.88□□□□□ -0.19
APOC4P55056 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
APOC4P55056 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
APOC4P55056 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
APOC4P55056 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
APOC4P55056 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
APOC4P55056 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
APOC4P55056 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
APOC4P55056 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC4P55056 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC4P55056 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
APOC4P55056 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.87□□□□□ -0.19
APOC4P55056 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.87□□□□□ -0.19
APOC4P55056 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
APOC4P55056 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
APOC4P55056 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC4P55056 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC4P55056 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
APOC4P55056 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
APOC4P55056 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC4P55056 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC4P55056 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC4P55056 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC4P55056 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
APOC4P55056 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.87□□□□□ -0.19
APOC4P55056 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.87□□□□□ -0.19
APOC4P55056 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC4P55056 NEK4P2-201ENST00000580004 1012 ntBASIC13.87□□□□□ -0.19
APOC4P55056 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
APOC4P55056 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
APOC4P55056 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC4P55056 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC13.87□□□□□ -0.19
APOC4P55056 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
APOC4P55056 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.87□□□□□ -0.19
APOC4P55056 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.87□□□□□ -0.19
APOC4P55056 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
APOC4P55056 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
APOC4P55056 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOC4P55056 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
APOC4P55056 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC4P55056 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC4P55056 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
APOC4P55056 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC4P55056 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC4P55056 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC4P55056 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOC4P55056 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
APOC4P55056 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.86□□□□□ -0.19
APOC4P55056 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC4P55056 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC4P55056 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
APOC4P55056 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC4P55056 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms